Gene P9211_12391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_12391 
Symbol 
ID5730458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1114407 
End bp1115468 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content33% 
IMG OID641285607 
Productnucleoside-diphosphate-sugar pyrophosphorylase 
Protein accessionYP_001551124 
Protein GI159903780 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0812001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0145083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATT TCAAGAAAGC ATGCATAAAT TATTCTTCTA GCGCATTAGA AGCACTAGAG 
GTAATTAATT CAAGCAATCA TGCCTACATA GCACTTGTGG TAGATGATTC TAATCTTCTT
ATCGGAACAA TAACTGATGG AGATATCAGA CGAGGGCTAT TAAAGGGAAA AACACTGGAA
GCAAAAGCTA CAGACTTTAT GAATAGGAAT TTCGACAGCA TTGATCAGCG AGAAGTTTCT
AAATCATTAA TTAATCAGAA ATTTAAAAAT GGGATCAATC AATTGCCAGT AATTGATAAC
GAAGGGAAGA TAGTTGGATT AATAATGAGG GAAGGTCAGA CAAAGGAATG TCTTAGTACT
AAGCCAAATT CAGTAGTAAT AATGGCTGGA GGTAAAGGTT CTAGACTAAA ACCACATACA
AATAATTGTC CTAAACCAAT GCTTCATGTT AATGGAAAGC CTATAATAGA AATAATAATA
AGAAATTGTA TAGATTTTGG CTTAACCAAG TTCTTTATTT CTGTAAACTA TTTAAAAGAG
CAGATAATAA ACCATCTAGG GGATGGATCT ACTCTAGGGG TAGATATAGA GTATCTATAC
GAAGACATGC CATTAGGTAC AGCAGGTTCA CTTCATTTAC TGCCAAAGGA TATTAAAGAA
ACAATACTAA TATTAAATGG TGATGTACTA ACTAATTTAA ATTTACATGG TTTAATTAAT
TTTCATCAAG AGAATAATGC TGATATTACT CTATGCGCAA GAGAAGAATC CACATTGATA
CCTTATGGAG TAATTAAGCT AGATGGTATT AACGTAGAAG AGTTAAAAGA GAAGCCAATA
CATTCATACC TAGTAAACGC TGGCATATAC CTAATCAATC CTGGCATTCT AAGATTAATT
GAGTCTAACT CCTATTTAGA TATGCCAAAC CTGATATTAA AGGCTAAGAA AAATGGATCG
CATATTATTG CATTTCCTAT TCATGAATAC TGGATAGATG TGGGAAGACC AGAGACTCTT
AAGCAAGCAC ACAATGAATG GAGCGTTAAT GATAATATTT AA
 
Protein sequence
MVDFKKACIN YSSSALEALE VINSSNHAYI ALVVDDSNLL IGTITDGDIR RGLLKGKTLE 
AKATDFMNRN FDSIDQREVS KSLINQKFKN GINQLPVIDN EGKIVGLIMR EGQTKECLST
KPNSVVIMAG GKGSRLKPHT NNCPKPMLHV NGKPIIEIII RNCIDFGLTK FFISVNYLKE
QIINHLGDGS TLGVDIEYLY EDMPLGTAGS LHLLPKDIKE TILILNGDVL TNLNLHGLIN
FHQENNADIT LCAREESTLI PYGVIKLDGI NVEELKEKPI HSYLVNAGIY LINPGILRLI
ESNSYLDMPN LILKAKKNGS HIIAFPIHEY WIDVGRPETL KQAHNEWSVN DNI