| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_11041 |
|---|
| Symbol | rsuA |
|---|
| ID | 5730333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 1007239 |
|---|
| End bp | 1007952 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641285471 |
|---|
| Product | 16S rRNA uridine-516 pseudouridylate synthase |
|---|
| Protein accession | YP_001550989 |
|---|
| Protein GI | 159903645 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0249401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.321161 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGC AAAGGCTGCA AAAAATTATT GCTGAGTCAG GAATATGCTC TAGGCGTAAA
GCAGAAGAGT TAATTATCCA ACATAAAGTT CTGGTGAATG GATTTGCGGC AAAAATTGGG
GATAAAGCAA ATCCTGAAAA CGATCAAATA ATTGTAAATG GTTATAGGAT CCCAAAGGTA
ATTTTCAATA GAGTGATTCT TCTTAATAAG CCTAGAGGTA TTATTAGCAG CTGTAATGAT
CAATTTGGAA GAAAAACTGT TTTAAGCCTA ATACCAAGCG ATATTAGGAA AGGTCTATAT
CCAATAGGAA GATTAGATTA TGAAAGTAGA GGTGCAATAT TACTAACCAA TAATGGTGAT
CTAACTTTAA AGCTAACACA CCCAAAATTC AACCATACAA AATCATATTT TGTATGGGTC
AAAGGATTAC CTAGTAGCTC AACACTTTCT GAGTGGAGGC AAGGAACAGT TCTTGATGGA
AAGATAACAA TGAAAGCAAA GGTTAATCTT ATAAAGTCTC TCAAACATCA AAGTTTGATC
CAAATAGAAA TGAAAGAAGG TAGGAATAGA CAAATAAGAC GGATATCCGA GAAATTTGGT
CACCCAGTAA TCGATCTAAA AAGAGTTGCC ATATCAAAAA TAAAACTTGG CAACCTTCAA
GAAGGATGCT GGAGAGAAGT TAAAGAAGAT GAGTTATCAT GTTTATACCA ATAA
|
|---|
| Protein sequence | MIKQRLQKII AESGICSRRK AEELIIQHKV LVNGFAAKIG DKANPENDQI IVNGYRIPKV
IFNRVILLNK PRGIISSCND QFGRKTVLSL IPSDIRKGLY PIGRLDYESR GAILLTNNGD
LTLKLTHPKF NHTKSYFVWV KGLPSSSTLS EWRQGTVLDG KITMKAKVNL IKSLKHQSLI
QIEMKEGRNR QIRRISEKFG HPVIDLKRVA ISKIKLGNLQ EGCWREVKED ELSCLYQ
|
|---|
| |