| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10961 |
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| Symbol | lysA |
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| ID | 5731074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 996900 |
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| End bp | 998267 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641285463 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001550981 |
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| Protein GI | 159903637 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.297348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.231621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTGTTT CAAGGCTCTT CGACTTAAAT AAGGATCAAA ACAGTCCCAA TAGAAACATA
ACTCCAATTA CTGCTGAACT GGACAATTCA GATAGAATGA CAGTTGGCGG ATGTTTGCTT
AGTGATCTTG CCAATCAATA TGGGACACCT CTTTATGTAA TTGATGAGGC CAGTATTAGA
AGCTCTTGCA GGGCATATAG GAAGGCTCTC AAACAAAGCT ACCCTGGGGA TTCTTTTGTT
TTATACGCCT CTAAAGCAAA TAGTTCTTTG GCTATTGATA GGATTGTTGC TTCAGAAGGA
CTGGGTATAG ACGTAGTTTC CGAGGGTGAG TTAATTACAG CCTTAAAAAG TGGTGTCGCA
GGGGAACAAA TTGTTTTACA TGGAAATAAC AAGTCTGACA AGGAGTTGTT ACTAGCGCAT
GAGAGTAACG CAACTATTAT CATTGATAAT CAACATGATA TACAGCGCTT GGATAAACTA
ATTAGCCATA AAGAAGGTAG TGTTAGATTA ATGTTACGCT TTACCCCAGG AATAGAATGC
CATACGCATG AATATATTCG TACAGGTCAT TTAGATAGTA AGTTTGGGTT TGACCCTGAG
CAAGTTTCAG ATACATTTGC ACAATTAAAG GATTATAAAT GGGCAAAATT AGTTGGTCTT
CATGCACATA TAGGCTCTCA AATTTTCGAA TTATCACCTC ATATGGATTT GGTAGAAGTT
ATGGCAGATT TCTTTTTAAG AGCAAAAGAT CTAGGTCATC CTATAAAAGA CTTAAATATT
GGCGGAGGAC TTGGTGTTAA ATATATTCCT TCTGATGATC CCCCAGATAT TTATAGTTGG
GTAGAAACTG TATCAAATGC TGTTATTAAA GCATTTGATA CAAGAAATAT TGAATTGCCA
AGACTGATTT GTGAGCCTGG GAGGTCAATT ATTGCTACTG CAGGGCTAAC TCTCTATAGA
ATTGGAGCTC GTAAAGATAT TCCAGGAGGA AAGACCTATC TGTCAATAGA TGGAGGAATG
AGTGATAACC CTCGCCCAAT AACTTACCAA TCCACTTATA CAGCTTGTTT AGTTGACAGA
CCATTGGCTA ATACTGATCA GGTCGTCACA ATTGCTGGAA AACATTGTGA ATCAGGAGAT
ATTCTTTTAA ATAATATTGC TTTACCCACC GCTTCTAGTG GTGATGTCCT GGGTGTTTTT
GGCACAGGAG CTTATAACCT TTCTATGAGC TCTAATTACA ATAGAATTCC AAGACCGGCT
TCAGTTTTGG TTAATAATGC ACAGTCAGAT CTTGTTCAAG TAAGAGAGTT GCCTGAAGAT
CTATTGCGAT ATGACCGCCT TCCAGATCGC TTTATTGCCA AAGGGTAG
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| Protein sequence | MGVSRLFDLN KDQNSPNRNI TPITAELDNS DRMTVGGCLL SDLANQYGTP LYVIDEASIR
SSCRAYRKAL KQSYPGDSFV LYASKANSSL AIDRIVASEG LGIDVVSEGE LITALKSGVA
GEQIVLHGNN KSDKELLLAH ESNATIIIDN QHDIQRLDKL ISHKEGSVRL MLRFTPGIEC
HTHEYIRTGH LDSKFGFDPE QVSDTFAQLK DYKWAKLVGL HAHIGSQIFE LSPHMDLVEV
MADFFLRAKD LGHPIKDLNI GGGLGVKYIP SDDPPDIYSW VETVSNAVIK AFDTRNIELP
RLICEPGRSI IATAGLTLYR IGARKDIPGG KTYLSIDGGM SDNPRPITYQ STYTACLVDR
PLANTDQVVT IAGKHCESGD ILLNNIALPT ASSGDVLGVF GTGAYNLSMS SNYNRIPRPA
SVLVNNAQSD LVQVRELPED LLRYDRLPDR FIAKG
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