Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_10941 |
Symbol | uppS |
ID | 5730306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 995163 |
End bp | 995963 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641285461 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_001550979 |
Protein GI | 159903635 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.291205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.66612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACT CTTCGTCAAT TACCTCTGAT CAAAAGCATT TTGCTCAGTC TTTACCTGAA GGGCTTGATC CTCTTCGGAC ACCAGAGCAT ATTGCTGTGA TCATGGATGG TAATGGAAGG TGGGCTAAAG CTCGGGGCTT ATCACGAACT AAGGGTCATA TTGCAGGCGT TGATGCTTTA AAAGCAACTT TGCGTTTATG CAGTGATTGG GGTCTAAAAG CACTTACTGT TTATGCTTTC TCAACAGAGA ATTGGTCAAG GCCTAGTGAA GAAGTTACTT TTTTAATGGC ATTATTTCAG CGTGTATTAA AAAGAGAACT TGAGGCTCTA ATTCTACAAG AAGTAAGAAT TAGGTTTCTT GGTGATTTAG ATCAATTACC AGGACAACTG CAAGATTTGA TAACTGAGGC AACAGTATTA ACTTCAGGGA ACAAAGGTAT ACATTTTAAT GTGTGCACTA ATTATGGCGG TAGAAGAGAG TTAGTAAAGG TGGCACAGAG GCTTGCAGAA AAATCTGTTA ATGGAGATTT GGATCCTTCC TTAATAGATG AGAATGTTTT TGCAGCTGAA CTATGTACTG CAAATGATGT AGACCCAGAT CTTCTTATTC GTACAAGTGG TGAAAGAAGA TTAAGTAATT TTCTTCTTTG GCAATTGGCC TATGCAGAGA TCCATGTTAC TGATGTTTTG TGGCCAGACT TTGACAAGAG CTCACTTTTA AAAGCCCTTT TAGACTACCA ATCTCGTTCT AGGCGCTTTG GAGGACTACA ACAAATTACC TCTAATAGAA ACAAAACCTA G
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Protein sequence | MTNSSSITSD QKHFAQSLPE GLDPLRTPEH IAVIMDGNGR WAKARGLSRT KGHIAGVDAL KATLRLCSDW GLKALTVYAF STENWSRPSE EVTFLMALFQ RVLKRELEAL ILQEVRIRFL GDLDQLPGQL QDLITEATVL TSGNKGIHFN VCTNYGGRRE LVKVAQRLAE KSVNGDLDPS LIDENVFAAE LCTANDVDPD LLIRTSGERR LSNFLLWQLA YAEIHVTDVL WPDFDKSSLL KALLDYQSRS RRFGGLQQIT SNRNKT
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