| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10731 |
|---|
| Symbol | clpB |
|---|
| ID | 5730709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 970302 |
|---|
| End bp | 972893 |
|---|
| Gene Length | 2592 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641285440 |
|---|
| Product | ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB |
|---|
| Protein accession | YP_001550958 |
|---|
| Protein GI | 159903614 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.977517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.696601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTT CCCCGGAAAA TTTTACTGAG AATGCATGGA ATTCAATCTT ATTAGCCCAA
AGTCATGCTC AAGAAAATAA CAATCAATAC ATTGAGACAG AGCACTTACT GCTTTCTTTA
ATAGAAAAGA GTGATTTTTG CCAGAAAGTT CTTAATAAAG CCGGCTGCGA AATAGATAAG
GTTATTTCTG ATTTAAATGA TTTCATTAAA AATCAACCCA AAATGAAGTC TCGCCCTGAA
ACATTATTTG TTGGTCAAGG CTTAAATGTA ATCATTTCAA AGGCCGAAGA TAAGAGACTT
GAATGGAAAG ATGACTATAT ATCTGTTGAG CATCTATTGC TAACGCTTAC CAATGACAAA
AGATGCTGTA AAGATATTCT TTCAAGGGCG AATATAGAAG AGAAGAACCT AAATTCAAAG
ATAGTGTCAA TGCGTGGGAG CCAAGGTGTG ACCGATAAAA ACCCTGAGAA CAAATATGAA
TCCCTAGAAA AATATGGAAG AGACTTAACC TCAGCAGCCA AAGAGGGGAA ACTGGACCCT
GTTATTGGAA GAGATGATGA AATTCGACGC ACTATTCAAA TCCTTAGTAG ACGAACCAAA
AACAATCCGG TATTAATTGG TGAGCCAGGA GTCGGAAAAA CGGCGATAGT GGAAGGCCTT
GCTCAACGAA TAATCAATGG AGATGTCCCA TCGGCTTTGC AAAATCGTCA GCTAATTGCT
CTGGATATGG GCGCTCTAAT CGCCGGTGCT AAATATCGTG GTGAGTTTGA AGAAAGACTA
AAGGCTGTAC TCAAGGAAAT AACTTCTTCA GATGGTCAAA TAATACTTTT TATCGACGAG
ATACATACTG TTGTAGGCGC TGGAGCTACA GGAGGATCGA TGGATGCGAG CAACTTATTA
AAACCAATGC TTGCGAGAGG TGAGCTCAGG TGCATAGGTG CTACAACACT TAATGAGCAT
CGCCAGCATT TCGAGAAAGA TCCTGCATTA GAAAGAAGGT TTCAACAAGT ACTCATAAGC
CAGCCTTCCG TAGAAGATAC TGTCTCAATC TTACGAGGAC TAAAAGAAAG GTATGAAGTG
CATCATGGCG TAAGAATCTC AGATAATGCC TTAGTCGCAG CAGCAACATT AAGCAATAGA
TATATAGCTG ACAGATTCCT TCCAGATAAA GCTATTGATT TAATTGATGA ATCAGCTTCC
AAATTAAAGA TGGAAATAAC CTCCAAGCCA GAGGAATTAG ATGAAATTGA CAGGAGGATA
CTTCAGCTGC AAATGGAGAA ATTTTCTCTA AAAAGAGAGT CAGATATAAC AAGTAAAAAC
AGACTTTTGA TAATAGAAGA AGAGCTAAAA TCCTTTAAAA ATAAGCAATC AGAACTTAAT
AACCAATGGC AGAAGGAAAA GGATTCAATT AGTGAGCTTT CACTAATAAA GGAGGAGATC
GAGAAAGTAC AATTCCAGAT AGATCAATCA AAAAGAAATT ATGACTTAAA CAAAGCTGCT
GAGCTTGAAT TTGGTGTTAT ATCACAATTA CAAAGTAAAT TATCAGAGAA AGAAGATCTA
CTTAGAGAAG AAAATAGCTC CAGAGAAAAG CCTCTTTTAA GAGAGGAAGT TACCGAAGAT
GATATTGCTG AAGTAATCTC TAAATGGACC CATATTCCAG TTAAAAAGCT CGTAAAATCT
GAAGTAGAAA AGATACTAGA TCTTGAAGAG AAGTTGAACA GAAAAGTAAT TGGTCAGCCA
AAAGCAATTA AAAGTATCAC AGAGGCGATA CAACGATCCA GAACAGGCCT AAGTGATCCA
TACAGACCAA TAGCCACCTT CCTATTCCTT GGCCCTACAG GAGTAGGAAA AACTGAATTA
ACTAAATCAT TAGCACAAGA ATTATTTGAT AGTGAAAAAT CTATTATTCG AATTGACATG
TCTGAGTATA TGGAAAAACA TTCTATTAGT AGACTAATAG GAGCCCCTCC AGGCTATATA
GGGTATGAAT CTGGTGGACA ATTATCTGAG GCTGTTAGAA GAAGACCCTA CTCTGTCATA
TTATTTGACG AAGTTGAAAA GGCTCACCCT GAAATATTTA ATTTAATGCT TCAGATTTTT
GATGAAGGAA GAGTAACTGA CAACCAAGGA AGGACTATTA ACTTTACCAA CACTATTATT
ATCCTAACAA GTAATATTGG CAGTCAATCA ATAATAGAAT TATGTGGGCA ACACTCAAAT
TATGATAGGA TTACAGAAGT AGTAAATAAG GAATTAAAGA ATCACTTTAG GCCTGAATTT
CTTAATAGAA TCGATGAATC AATAATATTT AATAGCTTAA CCAAGAAAGA TCTAAATGAA
ATAATACTAA TTCAACTAGA GAGAATCAAA CAAAGGCTTT TAGATAAAGG CCTAGATCTA
AAAATAGACC AACAAGCTAT TTCATGGCTA TCAGAAAAAG GTTACGACCC TAGTTATGGA
GCCAGGCCTC TAAAAAGAAC AATTCAAAAT GAACTAGAAA CACCAATTGC ACGAAAGATT
CTAATGAATA ATTATGCAAA AAATAAAGCT ATAAATGTAG AAATAAAAGG GGGAGAACTA
AATATAAGTT AG
|
|---|
| Protein sequence | MQASPENFTE NAWNSILLAQ SHAQENNNQY IETEHLLLSL IEKSDFCQKV LNKAGCEIDK
VISDLNDFIK NQPKMKSRPE TLFVGQGLNV IISKAEDKRL EWKDDYISVE HLLLTLTNDK
RCCKDILSRA NIEEKNLNSK IVSMRGSQGV TDKNPENKYE SLEKYGRDLT SAAKEGKLDP
VIGRDDEIRR TIQILSRRTK NNPVLIGEPG VGKTAIVEGL AQRIINGDVP SALQNRQLIA
LDMGALIAGA KYRGEFEERL KAVLKEITSS DGQIILFIDE IHTVVGAGAT GGSMDASNLL
KPMLARGELR CIGATTLNEH RQHFEKDPAL ERRFQQVLIS QPSVEDTVSI LRGLKERYEV
HHGVRISDNA LVAAATLSNR YIADRFLPDK AIDLIDESAS KLKMEITSKP EELDEIDRRI
LQLQMEKFSL KRESDITSKN RLLIIEEELK SFKNKQSELN NQWQKEKDSI SELSLIKEEI
EKVQFQIDQS KRNYDLNKAA ELEFGVISQL QSKLSEKEDL LREENSSREK PLLREEVTED
DIAEVISKWT HIPVKKLVKS EVEKILDLEE KLNRKVIGQP KAIKSITEAI QRSRTGLSDP
YRPIATFLFL GPTGVGKTEL TKSLAQELFD SEKSIIRIDM SEYMEKHSIS RLIGAPPGYI
GYESGGQLSE AVRRRPYSVI LFDEVEKAHP EIFNLMLQIF DEGRVTDNQG RTINFTNTII
ILTSNIGSQS IIELCGQHSN YDRITEVVNK ELKNHFRPEF LNRIDESIIF NSLTKKDLNE
IILIQLERIK QRLLDKGLDL KIDQQAISWL SEKGYDPSYG ARPLKRTIQN ELETPIARKI
LMNNYAKNKA INVEIKGGEL NIS
|
|---|
| |