Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_10361 |
Symbol | ubiD |
ID | 5730118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 928417 |
End bp | 929946 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641285403 |
Product | 3-polyprenyl-4-hydroxybenzoate decarboxylase |
Protein accession | YP_001550921 |
Protein GI | 159903577 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.78651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGATT TTCTCTCTTT CCTAGAAAAA AAAGGTCAAT TAAAAAGAAT ACATGAACCT GTAAGCCCTG ATCTTGAACT TACAGCAATA AGTGATCGTG TTCTCAGCAT GGGAGGTCCT GCATTACTTT TCGAAAATGT CATTGGATCA TCAATTCCTG TAGTCACAAA TGTCCTTGGC ACAATCGACA GAGTTGCTTG GAGTATGGGG CTAGAAAAAG TGGAGGAGCT TGAAGCTATA GGAGAAAAAC TTGCCCTTTT ACAACAACCA AAACCACCAA GAGATGCCAA GGAAACCTTC GAGCTAGGAG GATTGCTATG GAACTTGATT AAAGCTCGTC CAGACTATGA TTTGACTCCT GCATGTCATC AGACAATTCT TAACAACGAG GCAGTTGACT TAGATCAACT ACCTTTGACT AGACCATGGC CGAATGACGC CGGTAGCGTA ATTACTTTCG GGCTAGTAAT TACAAAAGAT CCAGAAACAA AAGTACCAAA TGTAGGTATT TACCGACTAC AAAAGCAATC CTGTAACACA ATGACTGTCC ACTGGCTTAG CGTTAGAGGA GGAGCTGGTC ATCTTAGAAA AGCTGCTGCT TTAGGTCAAA AACTAGAAGT TGCAATCGCA ATAGGAGTAC ACCCACTTAT TATTATGGCG GCAGCCACTC CGATACCTAT TCAATTAAGC GAATGGTTAT TCGCAGGACT TTATTCTGGT AAAGGAGTAA GACTTACTCG TTGCAAAACA CTAGATCTTG AGATCCCAAG TAGTGCAGAA ATAGTATTAG AAGGAACAAT AACACCTGGC GAAGAAATGT CAGACGGTCC TTTTGGAGAC CACATGGGGT TTTACGGAGG CATAGAAAGT TCGCCTCTCA TTCGCTTTCA CTGTATTACC AAAAGAAAGA ATCCAATATT TCATACAACC TTTAGCGGGA AGCCACCCAA AGAGGAAGCC ATGCTAGCAA TTGCTCTAAA TAGAATTTAT ACACCAATTC TACGTAGACA AGTACCAGAG ATCGTCGATT TCTTTCTTCC GATGGAAGCA CTAAGTTATA AATTAGCTAT TATTTCTATT GACAAAGCAT ATCCTGGGCA AGCGAAAAGA GCATCAATGG CATTTTGGAG TGCTCTCCCA CAATTTACTT ATACGAAGTT TATTGTTGTA GTTGATTCAA GTATCAATGT AAGAGATCCA CGACAAGTAG TCTGGGCAAT ATCAAGCATG GTGGACCCAC AAAGAGATCT CTTAATAATT GAAAACACAC CTTTCGATTC TCTTGATTTC GCCAGTGAAA AGATAGGTCT TGGAGGAAGA ATGGCTATTG ATGCAACAAC TAAAATTGGG GCAGAGATAA ATCATCAATG GGGAGAGCAA CTGCAACATT CCAAAGAAAT CCAAAAGCGA GTAGATTCAA GATGGAAAGA GCTAGGTTTA TCTGATATAA CTAGCAACAA TCCCGACGCT ACATTGTTCG GATACGTTAT GGATTACTTC ATCAGTAGAA AGGAAATCAC AAATTCATAA
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Protein sequence | MRDFLSFLEK KGQLKRIHEP VSPDLELTAI SDRVLSMGGP ALLFENVIGS SIPVVTNVLG TIDRVAWSMG LEKVEELEAI GEKLALLQQP KPPRDAKETF ELGGLLWNLI KARPDYDLTP ACHQTILNNE AVDLDQLPLT RPWPNDAGSV ITFGLVITKD PETKVPNVGI YRLQKQSCNT MTVHWLSVRG GAGHLRKAAA LGQKLEVAIA IGVHPLIIMA AATPIPIQLS EWLFAGLYSG KGVRLTRCKT LDLEIPSSAE IVLEGTITPG EEMSDGPFGD HMGFYGGIES SPLIRFHCIT KRKNPIFHTT FSGKPPKEEA MLAIALNRIY TPILRRQVPE IVDFFLPMEA LSYKLAIISI DKAYPGQAKR ASMAFWSALP QFTYTKFIVV VDSSINVRDP RQVVWAISSM VDPQRDLLII ENTPFDSLDF ASEKIGLGGR MAIDATTKIG AEINHQWGEQ LQHSKEIQKR VDSRWKELGL SDITSNNPDA TLFGYVMDYF ISRKEITNS
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