Gene P9211_10011 details

Gene Information

• Locus tag: P9211_10011
• Symbol: typA
• ID: 5730726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9211
• Kingdom: Bacteria
• Replicon accession: NC_009976
• Strand: -
• Start bp: 890295
• End bp: 892094
• Gene Length: 1800 bp
• Protein Length: 599 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641285368
• Product: tyrosine binding protein
• Protein accession: YP_001550886
• Protein GI: 159903542
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.157886
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATTCAA AAAGTCAATC GATTCGCAAT ATTGCAATTA TTGCCCACGT AGATCATGGT 
AAGACAACTC TTGTCGACGC ACTCCTATCT CAATCGGGGA TTTTTCGCGA CAACGAGGCT 
GTACCGACCT GTGTAATGGA TTCAAATGAT TTAGAACGTG AACGGGGAAT AACCATACTT 
TCCAAAAATA CTGCAATTAC ATTTAAGGAC ACCCGAATAA ATATTGTCGA CACACCAGGT 
CATGCTGATT TTGGAGGAGA AGTTGAAAGG GTTCTTGGAA TGGTAGATGG TTGCTTATTG 
ATTGTTGACG CCAATGAAGG ACCTATGCCG CAAACGCGAT TTGTTCTCAA AAAAGCACTC 
GAAAAAGGAT TGAGACCAAT TGTGTTTGTT AATAAGATTG ATCGCCCAAG AGTTGATCCT 
GAGATAGCTG TTGATAAAGT TTTAGACCTT TTCATTGAAT TAGGGGCTGA TGATGACCAG 
TGTGATTTCC CTTATCTCTT TGGAAGTGGT TTGGGAGGAT TTGCAAAGCC GGATATGCAA 
ACTAAAAGTG ACAATATGAT TCCTCTGTTT GATTCAATAA TTAGACATGT CCCCCCCCCT 
GTGGGAGATA AAGACAAACC ACTTCAGCTT CAAATAACTA CTCTTGACTA TTCAGATTTT 
TTAGGACGAA TTATTATTGG AAGAGTTCAT AATGGCTATA TAAGAAGTGG TCAAAAAGCA 
AGCTTAATTA AGGAGGATGG ATCTATAAAA CATGGCAGAA TATCTAAATT ACTTGGATTT 
GAGGGCTTAC AACGAATTGA GAAAGAAGAG GCTATTGCAG GAGATATTGT TGCAATTGCA 
GGATTTCCAG ATGTAAATAT TGGGGAAACG ATAGCTTGCC CTGACGAGCC CAAAGCCCTC 
CCTTTAATCA AGGTTGATGA GCCTACATTG CAGATGACTT TCGTTGTTAA TGATTCTCCA 
TTCGCAGGGA AAGAAGGTAA GTTTGTAACA AGTAGACAAT TAAGAGAAAG ACTTTACAAA 
GAACTACTTA CAAATGTTGC ACTCAGAGTT GAGGATACAG ATACCCCAGA TAGCTTTGCA 
GTATGTGGTA GAGGTGAGTT GCATTTAGGT ATTTTAATAG AAACAATGAG GAGAGAAGGT 
TACGAGTTTC AGGTCTCTCA GCCACAGGTT ATTTTCAGAG ATATTGATGA ATTAACTTGT 
GAACCTTTTG AGACTCTTGT GTTAGATGTA CCAGAGGAAT CTGTTGGTAT TTGCATAGAA 
AGGCTGGGCG AACGAAAAGG GGAGATGCAA AATATGTTCA ATAGTAATGA TGGAAGAACT 
CAGTTGGAGT TTGTAGTTCC TTCTAGAGGC TTAATTGGTT TCAGAGGAGA ATTTATAAGA 
GCAACAAGAG GAGAAGGAAT TATGAGCCAT TCATTCTATG AATATCGACC AATGATAGGT 
GAATTTGAAT CTAGAAGAAA TGGAGTCTTG ATTTCTTTTG AAGAAGGTGT TTCTACTTTC 
TATGCTTTAA AGAATGCCGA AGATCGAGGT CAATACTTTA TTTCACCTGG AACAAAAGTG 
TATAAAGGAA TGATAATTGG AGAGAATAAT AGACCTCAGG ATCTAGAGAT TAATATTTGT 
AAGACTAAGC AATTGACAAA CATGCGGTCA GCAGGAGCCG ATGAACTTGA TACTCTTCAA 
TCACCTATTG ATATGAATTT AGAAAGAGCC TTGGAGTACA TTGGACCAGA AGAAATGCTT 
GAAGTAACAC CAGACTCTAT ACGACTTAGG AAAAAAGTAA TGAAAAGAAG AAGTAAGTAA 

 

Protein sequence

MNSKSQSIRN IAIIAHVDHG KTTLVDALLS QSGIFRDNEA VPTCVMDSND LERERGITIL 
SKNTAITFKD TRINIVDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL 
EKGLRPIVFV NKIDRPRVDP EIAVDKVLDL FIELGADDDQ CDFPYLFGSG LGGFAKPDMQ 
TKSDNMIPLF DSIIRHVPPP VGDKDKPLQL QITTLDYSDF LGRIIIGRVH NGYIRSGQKA 
SLIKEDGSIK HGRISKLLGF EGLQRIEKEE AIAGDIVAIA GFPDVNIGET IACPDEPKAL 
PLIKVDEPTL QMTFVVNDSP FAGKEGKFVT SRQLRERLYK ELLTNVALRV EDTDTPDSFA 
VCGRGELHLG ILIETMRREG YEFQVSQPQV IFRDIDELTC EPFETLVLDV PEESVGICIE 
RLGERKGEMQ NMFNSNDGRT QLEFVVPSRG LIGFRGEFIR ATRGEGIMSH SFYEYRPMIG 
EFESRRNGVL ISFEEGVSTF YALKNAEDRG QYFISPGTKV YKGMIIGENN RPQDLEINIC 
KTKQLTNMRS AGADELDTLQ SPIDMNLERA LEYIGPEEML EVTPDSIRLR KKVMKRRSK