Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_08951 |
Symbol | rpsR |
ID | 5731128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 794777 |
End bp | 794998 |
Gene Length | 222 bp |
Protein Length | 73 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641285260 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_001550780 |
Protein GI | 159903436 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.519961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000161977 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCAAGTT CAGTTTTTAA AAAAAAGCTT TCACCAATCA AGCCTGGTGA CCCTATTGAC TATAAGGATG TTGAAACACT CAAAAAGTTT ATTACCGAGC GCGGGAAGAT CCTTCCAAGA CGTCTTACAG GCTTGACTGC CCAACAACAG CGTGATCTTA CAGTCGCTGT TAAGAGAGCT AGAATAATAG CTTTGCTTCC TTTCGTTAAC CCTGAGGGGT GA
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Protein sequence | MPSSVFKKKL SPIKPGDPID YKDVETLKKF ITERGKILPR RLTGLTAQQQ RDLTVAVKRA RIIALLPFVN PEG
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