| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_08871 |
|---|
| Symbol | metH |
|---|
| ID | 5730304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 784654 |
|---|
| End bp | 788229 |
|---|
| Gene Length | 3576 bp |
|---|
| Protein Length | 1191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641285252 |
|---|
| Product | putative methionine synthase |
|---|
| Protein accession | YP_001550772 |
|---|
| Protein GI | 159903428 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000369495 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTA TTAATCATTT AAAAAAAAGG AACACAATAT TAGTATTTGA TGGCGGAATG
GGAACAGCAT TGCAATTACA GGAACTAAGC AAGGAAGATT TTGGAGGAAG TCAATTTGAA
GGTTGTAATG AGTATCTACT TATCTCAAAT CCAAAATCTG TTGAGAAGGT TCATAGAAGT
TATTTAGAAG TTGGTTGTGA TGTAATTGAG ACCAATACCT TTGGCGCAAC TTCTGTTGTA
TTGGCTGAAT ATGGATTGGA AAATAAAGCT TATCAATTAA ACTTAGCAGC CTCAAAGATG
GCTAAAACTT TAGCAAAAGA ATACTCAACT ATAAACAAGC CGCGTTATGC AGCAGGCTCG
ATTGGTCCCA CAACTAAACT CCCTACATTA GGCCATATAG ATTTTGATGA TTTAACGAAT
AGTTACCAGG AACAGGTTGA GGCATTAATT ACTGGAGGTA TTGATCTTGT ACTTGTAGAA
ACCTGTCAAG ATGTTTTACA GATTAAATCG GCATTATTGG CTATTAGTTT AGCTGAAAAA
AGTTTAGGAA TAAAAATACC AGTAATGGTC TCTATTACAA TGGAAACTAC TGGAACCATG
TTAATAGGCA CAGAGATATC TGCAGCATTA ACTATACTTG AGCCCTTTAA TATCGATATC
CTTGGACTTA ACTGTGCAAC AGGCCCAGAG GAAATGAAAT CCCATATTCA ATATCTATCA
TCTCACTCTC CTTTTATTAC CAGCTGCATT CCTAATGCTG GCTTGCCAGA AAATATCGGC
GGTAAAGCAC ATTATCGTTT AACTCCAATA GAACTAAAGA TGCAACTTAT GCATTTTATT
AAGGATTTAG GTGTTAAGGT TATTGGTGGA TGTTGTGGTA CCACTCCAGA ACATATTAAG
GGTTTAACTC AGTTAGTAGA AGAAATAACT AATTCAAATG ATCAGAATTT GCCATCGATA
AAAAAAATAG CAACACAACC TTCAGCTTCG TCTATATATG AAAAAATAAG TTATCAACAA
GATAATTCCT TTTTAATAGT TGGAGAAAGG CTTAATGCTA GTGGCTCTAA AAAGGTTCGA
GAGTTACTTA ACAAAGACGA CTGGGATGGA CTTGTATCAT TAGCTAAAGG CCAATTAAAA
GAAAACGCGC ATATTTTAGA CGTTAATGTT GATTATGTTG GTAGAGACGG AGTTGCCGAT
ATGAGTCGAT TAGTTTCAAA ACTAGTAACT AATGTAAATA TACCTTTAAT GCTTGATTCA
ACTGACTATG AAAAAATGGA AAGTGGTTTA AAGAAGGCTG GTGGTAAATG TATACTTAAC
TCCACTAATT TTGAAGATGG TCCGGATAGA TTCTTTCAGG TTTTACAGCT TTGCAAAAGT
CATGGTTCTT CTGTAGTAAT TGGAACGATA GATGAAGAAG GTATGGCAAG GACGGCTTCT
AAAAAATTAG ATATTACTAA GCGTTCTTAC AAAGAAGCAA CTTGTTTTGG ATTAAAAGAT
AGTGATATTT TCTTTGACCC ACTTGTCTTA CCTATTACTA CTGGTATTGA AGATGATAGG
CTTAATGCTA AGGAAACAAT ACTGGCTATA AAAAATATTA AGTCTCTATA TCCTTCGGTT
CATCTAATCC TTGGCATATC GAATGTTAGT TTTGGATTGA ACCCAGCTGC GAGAGTAACA
CTTAATTCTG TATTTTTGAA TGAATGTATT AATTCTGGTC TAGATTCTGC TATTATTTCT
CCATCCAAGA TTCTTCCATT AAGTAAAGTT AGTGAAGATA ACTTAAAGAT ATGTTTGGAT
TTAATATATG ACAAAAGAAA ATACCGAGAT CATATATGTA TATACGATCC CTTAACACAA
TTAACTAAAG CATTTGAAGG TGTTTCAGCA AAAAGTAAAT CATCTAGTGA TGACTTAAGT
AAACTACCAA TAGAAAAACG TCTTAAAAGT CATATAATAG AAGGAGAAAA GGAAAAATTA
AGAGAAAACC TCTTAATAGC TCTAGAGGGT TATAAACCAC TTCATATCGT AAATACTTTT
CTTCTAGATG GAATGAAGGT TGTTGGAGAA TTATTTGGAT CTGGTCAAAT GCAATTACCT
TTTGTACTTC AATCTGCTGA AACAATGAAA TATGCAGTCT CAATCTTAGA GCCATTTATG
GAGAAAACTA GTGATAGTAA ATCATCCAAA GGAAAATTTA TTATTGCTAC AGTTAAAGGT
GATGTACATG ATATAGGTAA AAACTTAGTT GATATTATTC TAACCAATAA TGGCTATGAA
GTGTTTAATT TAGGAATAAA GCAAGATGTA AACTCTATTA TAAAAGCTCA AGAAGGTATA
CAAGCAGACT GTATCGCTAT GAGTGGCTTG CTCGTGAAGT CTACAGCATT TATGAAGGAT
AACCTACAAG CTCTAAATGA AGCTAATATC CAAGTACCTG TAATTCTTGG CGGAGCTGCT
CTTACTCCTA GATTCGTTAA TACTGATTGT AGTCAGGTTT ATAATGGAAT GGTTATCTAT
GGAAAAGATG CTTTTACTGA CCTTAGATTT ATGGATGCTT ATATGGAAGC TAAAATTAAT
AACCGCTGGG ACAATAAGCT AGGTTTTCTA GATGGTAACC CTGATAATTT ATCAATTCCT
AATCCTTCAG CCAGTAAAAA TCCCGACTAT ATTAATGATA ATAAAACTAT CAAAATAACT
ACAAATAGTT TAAAAACAAA AGGAACTCTG CAAGCCAATA CTAGTAGATC TAATACCATT
CTTAAAGAGA AGCCTATTGT TCCCCCTTTC AAAGGAAATC GTATCCTGAA TTCCCAACAA
TTGGATCTTT CGCAATATTC ATTTTATTTA GATCGTAATG CACTTTTTTC TGGACAATGG
CAATTCAAAA AGAAAAAGGA ACAATCTCGC GAAGATTATG AACAGGATCT TATTGATACA
GCAGAGCCTA TTTTAGAATC ATGGATAACT CGCATACAGG AACAGAATCT AATTTCACCA
TCTTTAGTTT ATGGCTATTT CCCTTGTGCT CGAGTCGGAA ATTCTTTAAA AATTTATTCT
CTAACCTCCC ATCAATATTT AGGAACATTT ACTTTTCCTA GACAGCGATC AGGCAATAAA
CTTTGCATTT CAGATTATTT TAATGATCTG GAAAATGACA GACCAATTGA TTATTTGCCT
ATGCAAGCTG TCACTATGGG AGAAGAAGCT AGTATGTTCG CTCATAAACT TTATAAGGAA
GATAAGTACA CTGATTATTT ATTCTTTCAT GGTCTAATTG TTCAATTAGC TGAGGCATTG
GCAGAATACT CTCACTCTAT TATCAGAACT GAGTGTGGAT TTGCAGGTTT AGAGCCAAAG
AATATTAAAG ATATACTTGC TCAGAGATAT AGAGGCTGTA GGTATTCGTT TGGTTATCCT
GCATGTCCAA ATGTAGGTGA CTCTAGGCTT CAGTTAAAAT GGCTTGAAGG ATCAAGAATT
GGATTGAGCA TGGATGACAG CGATCAACTT CATCCCGAGC AAAGCACAAC TGCAATTATT
GCATTGCATA GCCAGGCTAA ATATTTCAGT GCTTAA
|
|---|
| Protein sequence | MDFINHLKKR NTILVFDGGM GTALQLQELS KEDFGGSQFE GCNEYLLISN PKSVEKVHRS
YLEVGCDVIE TNTFGATSVV LAEYGLENKA YQLNLAASKM AKTLAKEYST INKPRYAAGS
IGPTTKLPTL GHIDFDDLTN SYQEQVEALI TGGIDLVLVE TCQDVLQIKS ALLAISLAEK
SLGIKIPVMV SITMETTGTM LIGTEISAAL TILEPFNIDI LGLNCATGPE EMKSHIQYLS
SHSPFITSCI PNAGLPENIG GKAHYRLTPI ELKMQLMHFI KDLGVKVIGG CCGTTPEHIK
GLTQLVEEIT NSNDQNLPSI KKIATQPSAS SIYEKISYQQ DNSFLIVGER LNASGSKKVR
ELLNKDDWDG LVSLAKGQLK ENAHILDVNV DYVGRDGVAD MSRLVSKLVT NVNIPLMLDS
TDYEKMESGL KKAGGKCILN STNFEDGPDR FFQVLQLCKS HGSSVVIGTI DEEGMARTAS
KKLDITKRSY KEATCFGLKD SDIFFDPLVL PITTGIEDDR LNAKETILAI KNIKSLYPSV
HLILGISNVS FGLNPAARVT LNSVFLNECI NSGLDSAIIS PSKILPLSKV SEDNLKICLD
LIYDKRKYRD HICIYDPLTQ LTKAFEGVSA KSKSSSDDLS KLPIEKRLKS HIIEGEKEKL
RENLLIALEG YKPLHIVNTF LLDGMKVVGE LFGSGQMQLP FVLQSAETMK YAVSILEPFM
EKTSDSKSSK GKFIIATVKG DVHDIGKNLV DIILTNNGYE VFNLGIKQDV NSIIKAQEGI
QADCIAMSGL LVKSTAFMKD NLQALNEANI QVPVILGGAA LTPRFVNTDC SQVYNGMVIY
GKDAFTDLRF MDAYMEAKIN NRWDNKLGFL DGNPDNLSIP NPSASKNPDY INDNKTIKIT
TNSLKTKGTL QANTSRSNTI LKEKPIVPPF KGNRILNSQQ LDLSQYSFYL DRNALFSGQW
QFKKKKEQSR EDYEQDLIDT AEPILESWIT RIQEQNLISP SLVYGYFPCA RVGNSLKIYS
LTSHQYLGTF TFPRQRSGNK LCISDYFNDL ENDRPIDYLP MQAVTMGEEA SMFAHKLYKE
DKYTDYLFFH GLIVQLAEAL AEYSHSIIRT ECGFAGLEPK NIKDILAQRY RGCRYSFGYP
ACPNVGDSRL QLKWLEGSRI GLSMDDSDQL HPEQSTTAII ALHSQAKYFS A
|
|---|
| |