Gene P9211_08241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_08241 
Symbol 
ID5730494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp724768 
End bp726420 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content36% 
IMG OID641285188 
ProductType II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
Protein accessionYP_001550709 
Protein GI159903365 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.856004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000176206 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTCAAT TCTCAGTTAC TTCTATAAGG AATTTAGTAG ATCAATATTT TTCACTCCAG 
TGGTGTAGAG ATAACTTAGT TGTGCCTCTT GGTATTGAAC CATCATTACC ACCTAGTCCT
GGGGTTATCA CAATAGCCGT TGGTAATATT GTTTTCTTAG GAACGATTGG AAACACAATT
AAGGAAAGGA TAAATCAATC AGGATTAGAA TGTAAATTTG TAGAGAGATC ACCAGAGAAA
ATTAAAGAAA TACTTGATTT GGCAGCTGAG GAAAGGTTTA TAAGTGGAGA AGGTATTGAA
ATTTCTGAAT TTACTGAAGA GGCAGTAATA GCAGCCTTAC AAGATACTGC TACTGAAGGT
AATGATGATG ATTTCTCTTT GGAATTTGAT GATATAGAAG AAGAAGAATT AGTCGATGAG
ACTGAGGATC TAAGTAATGA AATGCTAGAA AGCAAAACAC AAAGAGCAGC TGGAATGATA
TTGATAAATA CATGCAGGTC AAATGTATCT GATATACATA TAGAGCCAAA GATCGATAAT
TATAAAATAA GGGTAAGAAG AGATGGAGTT ATGCAAAAGT TCTTATCTAT GCCAAAGAGG
GCTGGTATTC AATTAATAGC TTGTTTAAAA AACATGGCGC ATATGGATAT AGCAGAGAGA
AGGGCTAGTC AAGATGGAAA GATCCTAAGA CAATATGAAG GTAATCGAAT GGAGTTCAGA
TGCTCAACTG CTCCTGGTAA ATATGGGGAA GGAATGGTAC TTAGGATTCT AAACAGCGAT
GCCTCAGTAC TAAATTTAGA TGTTCTAATA CATATTGAGA AAGTCAGGAA TGAATTTAGA
AAGATAATAA ATAACACAAA TGGTATAGTT ATAGTTTCTG GACCAACAGG GTCTGGCAAA
TCAACAACTC TAGCAGCAGC ATTGAGAGAA AAAGACAATG GAGAACTTAA AATTGTAACA
GCAGAAGACC CTATTGAATA CGATCTTTCG GGGGATATAA TGCAACATCA AGTTAATAGA
GCCAAAAATC AAACATTTGC AAATTTACTT CGAACATTCC TTCGTCAAGA TCCTGACGTT
ATATTAATTG GAGAAACGAG GGATCCAGAA ACAGCAGAAT CTTCTATGGA TGCAGCAGAA
ACTGGACATT TAGTATTTAC AACACTGCAT GCAAATACAT CTTCCAGTTC ATTAACAAGG
CTACTTGACA TGGAAGTCCC TAAATATAAA TTAAACGCCT CAGTTAGAGG CGTATTAGCG
CAGCGTTTAT TGAGGAGGGT ATGTCCAGAG TGTAGTGTTC AAAGACCAAT TAATAATAAT
GAGTCTCAAA TAACTGGTAT ACGCCCTAAT ACACCTATAA GGTATGCAAA TGTACTTTCA
AGCGAAGAAA AAGAACAGCG AAAGAGAGAA GGAACTCTCT GCGGTCACTG TTCTGGGACA
GGATATAAAG GTAGGGTTGG TGCTTATGAG TTATTAGTAA TAAATAGACC AATCCAAAAT
GCTATAACTA GCAATAAGAC TGATAAGGAA ATCGAGGAAA TGGCTGTAGA TAATAATGAA
ATGCTTACTT TAATGAAATA TGGAGTAGAA TTAGTCAAGG AACAACTTAC TACTCTTTCA
GAGCTTGAGA GGGTTTGTAA ATCAGATGAC TAA
 
Protein sequence
MSQFSVTSIR NLVDQYFSLQ WCRDNLVVPL GIEPSLPPSP GVITIAVGNI VFLGTIGNTI 
KERINQSGLE CKFVERSPEK IKEILDLAAE ERFISGEGIE ISEFTEEAVI AALQDTATEG
NDDDFSLEFD DIEEEELVDE TEDLSNEMLE SKTQRAAGMI LINTCRSNVS DIHIEPKIDN
YKIRVRRDGV MQKFLSMPKR AGIQLIACLK NMAHMDIAER RASQDGKILR QYEGNRMEFR
CSTAPGKYGE GMVLRILNSD ASVLNLDVLI HIEKVRNEFR KIINNTNGIV IVSGPTGSGK
STTLAAALRE KDNGELKIVT AEDPIEYDLS GDIMQHQVNR AKNQTFANLL RTFLRQDPDV
ILIGETRDPE TAESSMDAAE TGHLVFTTLH ANTSSSSLTR LLDMEVPKYK LNASVRGVLA
QRLLRRVCPE CSVQRPINNN ESQITGIRPN TPIRYANVLS SEEKEQRKRE GTLCGHCSGT
GYKGRVGAYE LLVINRPIQN AITSNKTDKE IEEMAVDNNE MLTLMKYGVE LVKEQLTTLS
ELERVCKSDD