Gene P9211_06941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_06941 
Symbol 
ID5731819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp607122 
End bp607469 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content37% 
IMG OID641285057 
Productanti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
Protein accessionYP_001550579 
Protein GI159903235 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00555121 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.159245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGTTT CTTTGCGGGG AGGGTTTGAA CGGCGTAAAG GCTGTTTGGT GTTTTATTTC 
ACTGGTCAGC TAGATGCTTA CTCTGAAAAA CAGTTCACAG ATTTTGTAAA TGATGTTTTC
AGTGCTAATC AATTGCCAAT GGTTATAGAT CTTACAAAAA TTGATTTTAT TGATTCCTCT
GGTTTAGGAG CAATGGTGCA TACAGTCAAA CAATGTAAGA AATTAAAGAG GTCTTTTGTT
GTTGTTGGGA ATGCAAGAGT GATCCAAACA ATCAAGCTTG TTCGGCTAGA AGACTTTCTA
CACTTAGTTC CTGATTTAGA TACCGCTTTA ACTAAACTTG CAGCTTGA
 
Protein sequence
MTVSLRGGFE RRKGCLVFYF TGQLDAYSEK QFTDFVNDVF SANQLPMVID LTKIDFIDSS 
GLGAMVHTVK QCKKLKRSFV VVGNARVIQT IKLVRLEDFL HLVPDLDTAL TKLAA