Gene P9211_04231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_04231 
SymbolmrcB 
ID5730476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp398829 
End bp400637 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content40% 
IMG OID641284780 
Productputative penicillin binding protein 
Protein accessionYP_001550308 
Protein GI159902964 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCGAA AATTACCGGC ATTTCTATTT ATAGCCTTCG GCTCATTAAC AATTGGTTCA 
TTAATCGCAA TTACTGAAAG GTTTGCGACT GATTCAATAG ATTCTTTACT CCCTAATCCA
AGCAAAATAA CTTCATATAG TCGTCCTGGC ACTATTACAC TACTTGCATC AAACGAAGAA
ATAATTCAAA AATTAGGGCC TAACACTCGC CACAAGATCA GGCCTGGGGG AATGCCAAGG
CTAATCGAAC AAGCCTTTGT TGCGGCTGAA GATCGACGAT TTTATGAGCA TAAAGGTGTT
GATTTCTGGG GAATTGGAAG AGCTCTTATA ACCAATATCC GTCAACAAAG AGTCGCTGAA
GGCGCAAGTA CTATTACACA ACAATTGGCA CGAATAATTT TCTTAACCCA AGAGAGAACT
TATACAAGAA AGCTGAAAGA GATTGCTCTC GCATACAAGC TAGAACGTCA CTTCAGTAAA
AAAACAATCC TCGAGCAATA TATAAATAAC GTCTACCTTG GTTCTAGTGC TTATGGTGTT
GCTGATGCTG CCTGGATATA TTTTTCTAAA TCCCCTGATC TTTTAACACT TGAAGAGGTT
GCACTAATAG CAGGGCTAAC GCCTGCTCCC TCATTGTATT CACCCCTAGT TAATAGTGAC
TTAGCAATCA AACGAAGAGC AATTGTTTTA AAGAAAATGC ATCTTCAAGG CTTCATCTCT
AATTCTGAGT TAATGACATC CTTAAGATCT CCATTAAGCC TTAAGCCGGC TTACCCCAAA
TATTCTAAAA GCACTGCTCC ATTTTTCACA AGCTGGGTAG AGCAAAAACT GCCATATTTT
CTTTCTAAAG AGCAGCTCGA AGTTGGAGGC CTACAAATAA AAACTAGTTT AAACCTTAAT
TGGCAATCCA AAGCAAAATC AATCCTGCGT AACCAAAGCC CAGGGGAGAG GGAAGGGGCA
ATAGTCTCTA TCGAGCCAAG TACAGGGTTG ATAAGAGTAT TAGTAGGAGG AAAAGATTTT
AGTAGTAATC AATTCAATCG TGCTACTCAG GCATATCGCT CTCCTGGGTC AACTTTTAAA
GTATTCCCCT ATGCAGTAGC AATAAACGAA GGTTTTAAAC CTGAGGATTT AATGTTTGAT
ACCCCAAGAT GTTGGTATGG CTACTGCCCT AAAAATTTTG GAGGGAAATA TTATGGTGAA
GTTTCTCTTT CAGAAGCCTT CAGCAAATCA TTAAATACCA TTGCTATTGA TCTTTTAGCA
AAAGTAGGCT TTAAGAAAGT CATTGCCATG GCCAATCAAC TGGGTGTAGG GAATGAAGCC
AAACTTGGCC ATTACTACCC TTTAGCGATT GGAGCATATG AAGAGACAGT GTTAAACATG
ACAGGGGCTT ATGCTGGAAT TAATAATCGC GGTTTATACA TAGAGCCATC TCCTTTTGAA
GAAATTAGGG GGCCTGACAA CAGCATTATT TGGAGCAACG AGATAAACAA AAAGAGAAGC
AAAAGAGTCC TCTCCAAGCG AGTAGCAGAT ACAATAAACT GGATGCTAAG AAGAGTTGTT
AGCGAAGGTA CTGGTGTGGC AGCATCGCTA AAGACAAGGC AAGTCGCTGG CAAGACTGGG
ACTTCAGAAG GCAATAGAGA CCTTTGGTTT ATTGGGTCGA TCCCACAACT TACAACAGGT
GTTTGGCTGG GCTATGACAA TAATAAAGAG ATAAAAAGTA GTAGTGGAGA AGCTGCATTG
ATTTGGAAGC AATTTATAGA AGGAATAGAC GATGATTTTG AACCTTTAAA GTTTCCCAGA
AAACCATGA
 
Protein sequence
MGRKLPAFLF IAFGSLTIGS LIAITERFAT DSIDSLLPNP SKITSYSRPG TITLLASNEE 
IIQKLGPNTR HKIRPGGMPR LIEQAFVAAE DRRFYEHKGV DFWGIGRALI TNIRQQRVAE
GASTITQQLA RIIFLTQERT YTRKLKEIAL AYKLERHFSK KTILEQYINN VYLGSSAYGV
ADAAWIYFSK SPDLLTLEEV ALIAGLTPAP SLYSPLVNSD LAIKRRAIVL KKMHLQGFIS
NSELMTSLRS PLSLKPAYPK YSKSTAPFFT SWVEQKLPYF LSKEQLEVGG LQIKTSLNLN
WQSKAKSILR NQSPGEREGA IVSIEPSTGL IRVLVGGKDF SSNQFNRATQ AYRSPGSTFK
VFPYAVAINE GFKPEDLMFD TPRCWYGYCP KNFGGKYYGE VSLSEAFSKS LNTIAIDLLA
KVGFKKVIAM ANQLGVGNEA KLGHYYPLAI GAYEETVLNM TGAYAGINNR GLYIEPSPFE
EIRGPDNSII WSNEINKKRS KRVLSKRVAD TINWMLRRVV SEGTGVAASL KTRQVAGKTG
TSEGNRDLWF IGSIPQLTTG VWLGYDNNKE IKSSSGEAAL IWKQFIEGID DDFEPLKFPR
KP