Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_03041 |
Symbol | |
ID | 5731519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 287531 |
End bp | 289003 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641284651 |
Product | RecB family nuclease |
Protein accession | YP_001550189 |
Protein GI | 159902845 |
COG category | [R] General function prediction only |
COG ID | [COG2251] Predicted nuclease (RecB family) |
TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0542901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTATCC CTCCAATAGA AAGCAAGATA ATTACAGATC GTTTGCTAAG CAGTTGGATT CGCTGCAAGC GTAAAGCCTG GTTGGATGTA TATGAAAATA AAGAAAGAAA AATTTGGCTA GCTCACAGAA GCCTGCAACT TGATCACCAA TACAAAAGTC TCAAAGCATT TTCCTGTACA AAGCCAGGTT ATGGCATTAA AGGTTGCCTT AAAGGAGAGG AAAACGTTGT TGGGATCAGA CTAAAAACAA GCAATTTTTT TAATCATCAC ATAGAAGCTC ACCCTTTGAT ACTTCACAAA ACAAAAGGGA ATAGTTGCTT TGGGAACTTC AAATACCAAC CCGTAATTGT CAGGCAAGGG CGTAGAATTA CAAGAAATCA TAGACTTAGC CTTGCCTTAT GGGGGCATTT ACTAGAACAA TTCCAGCAAT CATCTATAGA CGAAGGTTTA GCCATCTCAT TAACTAAAAA CGGCCTAGAG ATAGATAAAG TTTTCCTTAG TAAGAAGCTT CACCAGCAAT TACTTAATTC AATAAATAAA TTGATTATAG ACTTAGATAA AAAAGATCCG CCATCACTAA CCTCAGACAG AAAAAAATGT GTGCTTTGCC CCTGGAATAA AGTATGCAAT AAGAAAGCTT TAGAAGAAGG TCATCTAAGT GAAATCAATG GAATTGGTTC AAAGCGACAG GAAATTCTTC AATCAATTGG AATTAACAAT ATTACAGAAT TAGCAAAAGC AAAGTCAATT TTTCTAAGCG ATAAGCTAGA CACTTTTGGG GGCAAAAATG ACATGCTTTC CCATCAATTA ATTAATCAAG CTAAAGTACA GCTAAGCTCA ATACCTAAGA GGATAAATAC AAACCCTGTC TTACCTGAAC TAAGCAATGT GCCTGGTGTT ATTATTTATG ATATAGAATC TGATCCAGAT GCTAACCATG ATTTTCTTCA TGGTTTTATT TCTATTAGGA AAACAGGAAT CAGGAATTGG GATGTAGATA ATTTTAATTA TAATAATATA CTTACTATCT CTAATAAGGA TGAAAAAGAT ACTTTATTTG AAATTTATAA ACAATTTAAT AATTTTAATT CCTGGCCCAT TCTTCATTAT GGAGAGACAG AATACTTGTC TTTTCAAAAG ATGGCAAAGC GTCATGGGAT GCCAGATTTA GAATTAAATT CTATTCAAAA TAGATTTGTA GATGTTCACG AAAGAGTAAG AAAACATTGG CTATTACCAG TTAATAGCTA TGGCCTCAAA GGTGTTGCTC AATGGTTAGG TTTTAAATGG GACCAAAAGA ATGTGGATGG AGCTCAAGCT TTACTATGGT GGAGACAATG GCGTTCAACA CAAAACAATT CAATAGTGCA CAAGGCTAAC CTTAAAAAAC TCCTCAGATA CAATCAGGAT GACTGCATAG CAACCTGGGT TATAGCACAA TGGCTTTTAA ATAATGATAG AGAACATAAA TAG
|
Protein sequence | MSIPPIESKI ITDRLLSSWI RCKRKAWLDV YENKERKIWL AHRSLQLDHQ YKSLKAFSCT KPGYGIKGCL KGEENVVGIR LKTSNFFNHH IEAHPLILHK TKGNSCFGNF KYQPVIVRQG RRITRNHRLS LALWGHLLEQ FQQSSIDEGL AISLTKNGLE IDKVFLSKKL HQQLLNSINK LIIDLDKKDP PSLTSDRKKC VLCPWNKVCN KKALEEGHLS EINGIGSKRQ EILQSIGINN ITELAKAKSI FLSDKLDTFG GKNDMLSHQL INQAKVQLSS IPKRINTNPV LPELSNVPGV IIYDIESDPD ANHDFLHGFI SIRKTGIRNW DVDNFNYNNI LTISNKDEKD TLFEIYKQFN NFNSWPILHY GETEYLSFQK MAKRHGMPDL ELNSIQNRFV DVHERVRKHW LLPVNSYGLK GVAQWLGFKW DQKNVDGAQA LLWWRQWRST QNNSIVHKAN LKKLLRYNQD DCIATWVIAQ WLLNNDREHK
|
| |