| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_02911 |
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| Symbol | lytB |
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| ID | 5730947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 275327 |
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| End bp | 276541 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641284637 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001550176 |
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| Protein GI | 159902832 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.648255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACTC AAGCTTTTAA GAGATCTCTT CATCATTCAG ATAGATATAA TCGAAGGGGG
TTTGAATCTC CTACAAAAAG AGCCCAGGCT CTTGAAAAGG CTTATCAAAG TAATTTGATT
GGATCGATTA GAGATAATGG ATATTTATTT GAGCACGGCA GATTACGGGT AAAGCTTGCA
GAGGCATTTG GCTTTTGTTG GGGAGTAGAA CGAGCAGTTG CAATGGCCTA TGAAACAAGA
AGACATTACC CCAAGGAAAG TATTTGGATT ACTAATGAGA TTATTCACAA TCCTTCGGTG
AATGATCACT TGAGAAATAT GAATGTGCGA TTTATTTCAG CTGAAAAAGG AATTAAAAAT
TTCTCTTCTG TCCAAGAAGG TGATGTCGTC ATACTGCCTG CATTTGGAGC AACAGTTCAA
GAGATGAAGC TCTTGCATGA GCGTGGTTGT CACATTATTG ATACAACTTG TCCTTGGGTC
TCAAAGGTTT GGCATACCGT TGAGAAGCAT AAGAAACATG AATTCACTTC GATTATTCAT
GGCAAAGTAA AACATGAGGA AACTCTTGCA ACAAGCTCTT TTGCAGGTAC CTATCTTGTT
GTACTTGATC TCGAAGAGGC TCAATACGTA GCTAATTATA TTCTGGGTAA AGGAGATAGA
GAAGAGTTCC TGAAAAGGTT TTCCAAAGCT TCATCTCAAG GCTTTGACCC AGATAGAGAT
CTTCAAAGAC TTGGAGTTGC TAATCAGACA ACCATGCTAA AAAGTGAAAC CGAGGAAATT
GGCCGTTTAT TTGAGAAAAC CATGCTTCGT AAGTATGGTC CAGCTGAATT AACTGAGCAT
TTTTTAGCTT TTAATACTAT TTGTGATGCT ACTGAAGAGC GGCAGGATGC AATGTTCTCG
CTGGTTGATG AGCCTTTAGA TCTACTTGTA GTTATTGGAG GTTTTAACTC TTCAAATACC
ACGCATCTTC AAGAAATTGC TATCAGCAGA GGTATTCGCT CTTTTCATAT CGATACTCCA
GAGAGGATAG GTGATCAAGA AAATACTATT ACGCACAAAC CTTTAGGAGA TGATTTAATA
ACTGAGAAGA ATTTTTTGCC TGAAGGAAAT ATAAGTGTCG GCATTACATC TGGTGCATCA
ACCCCAGATA GAGTGGTTGA ACATGTAATT CATAAGCTTA TTAATCTTAG CGAGGAGAAG
GCTTTTGTGG ATTAA
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| Protein sequence | MDTQAFKRSL HHSDRYNRRG FESPTKRAQA LEKAYQSNLI GSIRDNGYLF EHGRLRVKLA
EAFGFCWGVE RAVAMAYETR RHYPKESIWI TNEIIHNPSV NDHLRNMNVR FISAEKGIKN
FSSVQEGDVV ILPAFGATVQ EMKLLHERGC HIIDTTCPWV SKVWHTVEKH KKHEFTSIIH
GKVKHEETLA TSSFAGTYLV VLDLEEAQYV ANYILGKGDR EEFLKRFSKA SSQGFDPDRD
LQRLGVANQT TMLKSETEEI GRLFEKTMLR KYGPAELTEH FLAFNTICDA TEERQDAMFS
LVDEPLDLLV VIGGFNSSNT THLQEIAISR GIRSFHIDTP ERIGDQENTI THKPLGDDLI
TEKNFLPEGN ISVGITSGAS TPDRVVEHVI HKLINLSEEK AFVD
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