Gene P9211_02581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_02581 
SymbolgatC 
ID5731687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp248065 
End bp248358 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content36% 
IMG OID641284602 
Productaspartyl/glutamyl-tRNA amidotransferase subunit C 
Protein accessionYP_001550143 
Protein GI159902799 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA TTACTTCTGA TGATGTTCGT AAAGTAGCAA CTCTTGCAAG ATTAAATTTG 
CCAGAAGATC TTATTGATAC CTATACCAGC CAACTTGAAA AAATATTGGG CTATGTGGCT
CAATTAGAAG AGGTTGACAC TGAAGATATC CCTCCAACAT CAAGAGCAGT TGAGGTGACC
AATGTTTTAA GGGAGGATAT TATTCAAGAA ACAGATATTC GAGAAGATCT AATAAACTTA
GCTCCGAATA GAGAAGGGGA CTTTTTTCGA GTACCAAAGA TTCTTTCTGA ATAG
 
Protein sequence
MTKITSDDVR KVATLARLNL PEDLIDTYTS QLEKILGYVA QLEEVDTEDI PPTSRAVEVT 
NVLREDIIQE TDIREDLINL APNREGDFFR VPKILSE