| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_01641 |
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| Symbol | ndhF |
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| ID | 5730780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 158370 |
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| End bp | 160373 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641284508 |
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| Product | NAD(P)H-quinone oxidoreductase subunit F |
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| Protein accession | YP_001550049 |
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| Protein GI | 159902705 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.124159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATCGG CCGCTGAAAT CGCATGGTTA ATACCTTTGC TCCCTCTCAT CGGGGCGGTG
TTATCAGGAT TGGGATTAAT TAGTTTCAAC CGAGAAACCA ATCGGTTGAG AAAGCCTGTC
GCAATAAGTT TGTTGACATG TGTAGGGGCT TCAGCTGTAT TGAGTTATGC AGTTCTTTTA
GAACAAGTTT CTGGGGCCCC TCCAGTAGAG CATCTTTTTA TATGGGCTAG TGCTGGAGAC
TTCAGTTTGC CAATGGGGTA TGTAGTCGAC CCTTTGGCTG CGGTAATGCT GTCTTTGGTT
ACCACAATTG CCCTTTTGGT AATGATTTAT TCCCATGGGT ATATGGCTCA TGACAAAGGA
TATGTGAGAT TTTTCACCTA TTTGGCATTA TTTAGTAGCT CAATGCTGGG CTTAATAATT
AGTCCAAACT TGCTTGAAAT ATATGTTTTT TGGGAATTAG TTGGAATGTG CTCATATCTT
TTAGTTGGGT TCTGGTATGA CAGAGATGGT GCAGCTCATG CGGCTCAAAA AGCTTTTGTT
GTAAATAGAG TTGGTGATTT TGGACTTTTA CTTGGGATTC TTGGACTGTT TTGGGCTACG
GGAAGTTTTG ATTTTGATGG GATAGCTACA GGTCTGGCTG ATGCAACTGC TTCTGGCAAT
GTACCTGTAT GGGCGGCCTT ATTGCTTTGT TTCTTAGTCT TTATGGGCCC TATGGCTAAA
TCTGCTCAAT TTCCATTGCA TGTTTGGTTG CCAGATGCCA TGGAAGGGCC AACACCTATC
TCAGCATTAA TTCATGCCGC GACCATGGTT GCAGCTGGGG TGTTTCTTGT CGCGAGACTT
GAGCCTCTGT ATAGCCAATT CCCTTTTATT GGACTATTAA TAGCCATTTT TGGAACAATT
ACATGCTTTT TAGGGGCTTC AATTGCTTTG ACCCAGATGG ATTTAAAGAA GGGTTTAGCG
TATAGCACTG TTTCTCAGCT TGGTTACATG ATGCTTGCAA TGGGTTGTGG TGCGCCCATT
GCGGGGATGT TCCATTTGGT CACGCATGCT TTCTTTAAGG CAATGCTTTT CTTGGGATCA
GGTTCGGTGA TTCATGCAAT GGAAGAAGTA GTAGGGCATG AACCGATTCT TGCTCAAGAT
ATGAGACTAA TGGGTGGTTT ACGCAAAAAG ATGCCTATTA CTTCAATGAC TTTTTTGATT
GGATGTGTTG CGATTAGTGG AATTCCTCCT TTGGCTGGTT TCTGGAGTAA AGATGAAATA
CTTGGAGAGG CGTTTAATAC ATTCCCAATC CTTTGGGGAA TTGGCTTCCT AACTGCTGGG
ATGACAGCCT TTTATATGTT TAGGCTGTAT TTCCTTACAT TTGAGGGTAG CTTTAGGGGA
GATAATGTAG AGCTTCAAGA GGAGTTATTA GTTCTTGCAG GAAAAGATAA TGAAGAGCAA
GAAGATCATC ATTCTGGTTC AATTCACGAA TCCGCTTGGC CAATGACAGT GCCATTAGTT
GTTTTAGCTG TGCCTTCTGT GATTATTGGC TTTTTAGGTA CTCCATGGAA TAGCAGTTTT
GCAAAATTAC TTGATCCAAC AGAGGCAATT GAGATGGCAA CTAATTTTAG TTGGGGGGAA
TTCCTTCCTC TAGCCTTAGG GTCTGTTGCC ATTTCAATCG CTGGGATTTC CTTGGCAGTT
TTTGCTTATT TCTTGAAGCG AATCGATTTA GCTACAAACA TTGCACAGAG ATACCCAGCA
ATTAATGCTT TTTTATCGAA CAAGTGGTAT TTAGATGATA TTAATGAAAG GATTTTTGTT
CGTGGGAGCA GAAAATTAGC TCGTGAAGTT TTAGAGGTGG ATGCCAAGGT TGTTGATGGA
GTTGTTAATT TAACTGGGCT TTTAACTTTA GGAAGCGGAG AAGGATTGAA ATATTTTGAG
ACTGGCAGAG CACAGTTTTA TGCACTCATT GTCTTTGGAG GAGTAATAGC ACTAGTAGCT
CTTTTTGGAG TATTGGGTAC TTAA
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| Protein sequence | MLSAAEIAWL IPLLPLIGAV LSGLGLISFN RETNRLRKPV AISLLTCVGA SAVLSYAVLL
EQVSGAPPVE HLFIWASAGD FSLPMGYVVD PLAAVMLSLV TTIALLVMIY SHGYMAHDKG
YVRFFTYLAL FSSSMLGLII SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AAHAAQKAFV
VNRVGDFGLL LGILGLFWAT GSFDFDGIAT GLADATASGN VPVWAALLLC FLVFMGPMAK
SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGVFLVARL EPLYSQFPFI GLLIAIFGTI
TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPI AGMFHLVTHA FFKAMLFLGS
GSVIHAMEEV VGHEPILAQD MRLMGGLRKK MPITSMTFLI GCVAISGIPP LAGFWSKDEI
LGEAFNTFPI LWGIGFLTAG MTAFYMFRLY FLTFEGSFRG DNVELQEELL VLAGKDNEEQ
EDHHSGSIHE SAWPMTVPLV VLAVPSVIIG FLGTPWNSSF AKLLDPTEAI EMATNFSWGE
FLPLALGSVA ISIAGISLAV FAYFLKRIDL ATNIAQRYPA INAFLSNKWY LDDINERIFV
RGSRKLAREV LEVDAKVVDG VVNLTGLLTL GSGEGLKYFE TGRAQFYALI VFGGVIALVA
LFGVLGT
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