Gene P9211_01231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_01231 
SymbolaroK 
ID5730808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp123707 
End bp124300 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content38% 
IMG OID641284466 
Productshikimate kinase 
Protein accessionYP_001550008 
Protein GI159902664 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.428162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATT TATCTCGTTT CAATCAAGTA TGTAAAAAGT TAGGAGGTCG TAATCTTTAT 
TTAGTAGGGA TGATGGGATC TGGGAAGTCA CGAACAGGCC CAGTTTTAGC TAAAAAACTT
TCGTATGGTT TTGTTGATGT TGATGATGTT ATAGAAAAAG TTACTAATCA ATCCATTTCA
GAAATCTTTG ACCAAGAAGG TGAAATTGGC TTTAGAGAGA TAGAAACGCA AATTTTGCAA
GAGATTGGTC AGAGACATTC TCTAGTTGTA GCAACTGGCG GAGGTATTGT TACTCGACCA
GAAAATTGGG GAATATTGCA TCAAGGTGTT GTTATTTGGA TTGATCTAGA TCGTGAGATT
GCTTTGTCAA GATTGCGCTC TGATGAAACA CCGAGACCAT TACTTCAAAA AAACCTTGAC
GATAACTTTG ACTGTTTATT TAAGGAGCGC TTGCCTATTT ATTTGGAATC GGATGTACAT
CTTTCTGTTC GGGAAGAGTC TCCAGATGAC GTTGCAATTG GTATATGCAC TAACTTGCAA
TTGTTGCTTC TTAAAGATGA GGGTCTAGAC GGACGGCAAA CCATTGAAGA GTAA
 
Protein sequence
MDDLSRFNQV CKKLGGRNLY LVGMMGSGKS RTGPVLAKKL SYGFVDVDDV IEKVTNQSIS 
EIFDQEGEIG FREIETQILQ EIGQRHSLVV ATGGGIVTRP ENWGILHQGV VIWIDLDREI
ALSRLRSDET PRPLLQKNLD DNFDCLFKER LPIYLESDVH LSVREESPDD VAIGICTNLQ
LLLLKDEGLD GRQTIEE