Gene P9211_00871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_00871 
Symbolmgs1 
ID5731680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp92565 
End bp93932 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content37% 
IMG OID641284430 
Productrecombination factor protein RarA 
Protein accessionYP_001549972 
Protein GI159902628 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0752794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTCAAG ATCTTTTTAC TTTTCAGAAT GATCAAGAAC TCAAGAGGCA AGCACCTCTT 
GCAGAAAGAC TGCGCCCTAC AACGCTTGAT GATTTTGTTG GGCAACAAGC GATTCTTGGA
CCAGGAAGGC TCTTAAGAAG AGCTATTGAA TGTGATCGGG TTGGGAATAT TTTGTTTCAA
GGCCCCCCTG GTATTGGAAA AACAACTTTG TCTAAAATTA TTGCCTCTAA TACTAGGGCT
CACTTCAGTG AGCTTAATGC GGTTTTGTCA GGTATTAAAG AATTGCGTCA GGAAATTGAT
GCGGCAAAAA ATAGGTTAGG CCAGCATGGA CTTAGAACAA TACTTTTTAT TGATGAGGTG
CATAGATTCA CTACTTCTCA ACAAGATGCT CTATTGCCAT GGGTTGAAAA TGGAACTTTT
ATTTTTATAG GAGCAACAAC AGAAAATCCA TATTTTGAAG TAAATCAAGC TTTGGTAAGT
AGATCTAGAG TTTTTCGTTT ACGTCCGCTT CAGGAAAAAG ACATGTATCA GATTTTAGAT
AGAGCATTAA AAGATATAGA GAAAGGGTAT GGAGCTAAAG AAATTAAATT AACTATTCAA
GCAAAAAATC ATTTAATTGA TGTTGCCAAT GGTGATGCTC GTAGCCTCTT GAATGCTCTA
GAACTAGCGG TAGAAACTAC ACAGGCTGAT GACAAAGGTT GTATCAACAT TGATATTTCT
ATAGCAGAAG AATCTATTCA GGAACGTGCT GTTCTTTATA ACAAGAATGG AGATGCACAC
TTTGACACAA TCAGTGCCTT TATTAAATCA TTAAGAGGCT CAGACCCTGA TGCAGCATTG
TTTTGGTTGG CTCAAATGCT TGAAGCAGGA GAAAGTCCAA GATATATTTT TCGCAGAATG
CTTATAGCAG CAGCGGAAGA CATTGGTTTA GCAGATCCTA ACGCAATTGT TGTTATTGAG
TCTTGTGCTT CAGCTTTTGA CAGAGTTGGT TTACCAGAAG GTAATTATTT ACTTTCAGAG
GCTGCTCTTT ATCTAGCATG TACTGAAAAA AGTAATAGCG TTTTGGGCAT TAACTCAGCA
ATACACTCTG TTAAGAACTC TCAAAAGCAA GATGTTCCTA ATCATCTTCA AGATTCTCAT
AGGGACTCTG AAAAATCGAA AGCTCGATCT GATTACCTTT ATCCACATAA TTACCAAGGA
AATTGGGTAT CTCAACAATA TTTACCAAGA GATCTGCAGA GAGAAGTATT TTGGGAACCA
ACGATAAATG GTTGGGAAGG TAAGAGAAGA AAATTATTTG CTGAAAGAAA GAAAAGGCAA
ATTTCATCAG GGCTTGATTC TACCGAAAAC CAATCACCAA AATTTTAA
 
Protein sequence
MVQDLFTFQN DQELKRQAPL AERLRPTTLD DFVGQQAILG PGRLLRRAIE CDRVGNILFQ 
GPPGIGKTTL SKIIASNTRA HFSELNAVLS GIKELRQEID AAKNRLGQHG LRTILFIDEV
HRFTTSQQDA LLPWVENGTF IFIGATTENP YFEVNQALVS RSRVFRLRPL QEKDMYQILD
RALKDIEKGY GAKEIKLTIQ AKNHLIDVAN GDARSLLNAL ELAVETTQAD DKGCINIDIS
IAEESIQERA VLYNKNGDAH FDTISAFIKS LRGSDPDAAL FWLAQMLEAG ESPRYIFRRM
LIAAAEDIGL ADPNAIVVIE SCASAFDRVG LPEGNYLLSE AALYLACTEK SNSVLGINSA
IHSVKNSQKQ DVPNHLQDSH RDSEKSKARS DYLYPHNYQG NWVSQQYLPR DLQREVFWEP
TINGWEGKRR KLFAERKKRQ ISSGLDSTEN QSPKF