Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_00141 |
Symbol | |
ID | 5730613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 17159 |
End bp | 18160 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641284356 |
Product | tRNA-dihydrouridine synthase A |
Protein accession | YP_001549899 |
Protein GI | 159902555 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00872968 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTGCCA CTTACACTCC AAGAATTACT AACGCCTATC GTTTTAGTAT TGCGCCAATG CTGGACTGCA CAGATAGGCA TTTCAGGGTA ATTTTTCGAC AAGTCAGCCG AAGGTCATTG CTATATACGG AAATGATTGT AGCTAAAGCA TTGCAACATC AAAAAGGAAG GCGTCTTTTA GATTTTGATG AAATTGAACA CCCTATTTCA CTCCAAGTTG GCGGAGATAA TCCAAAAGAG CTAGCTGACG CTGCCAAGCT TGCAGAAGAT TGGGGATATG ACGAAATCAA TCTAAATCTT GGTTGTCCTA GTCCAAGAGT GCAATCAGGC AACTTTGGTG CATGCCTTAT GGCAACTCCA AATCAAGTCG CTAAATGCAT AGAAGCCATG AAAAATGCAA CCCAAATTCC TGTGACAATC AAACATAGAA CTGGCATTGA TAACTTTGAC AGTGAGGAAT TTCTTTTTTC TTTTGTCGAT CAAATAGCTA AAGCAGGAGC AGACAGATTT GCAATTCATG CTCGCAAAGC ATGGCTGGAA GGATTAAATC CAAAACAAAA TCGAACTATT CCACCATTGG AATATCTAAA AGTTAAAAAA TTAAAATTAA AGCGTCCCGA ATTAAAAATA GAGTTCAACG GCGGCTTACA TACACCAGAG GAATGTGTAA AAACTTTAAA GATATTTGAT GGGGCAATGG TTGGAAGATC CGCATATTCA AATCCTATGC TTTGGCAAGA AATGGATTCG TTAATTTATG GAGAGGATTA TTTTCCAGTA AAAGCTTCGC AAGTTATTCA AAATTTAATT CCATATGCAC AAAAGCACCT TGATAATGAA GGGAGGCTTT GGGATATAAG CAAACATCTT CTTCAATTAG TCCAAGCGGT ACCTGGAGCT CGTGCATGGA GACACAACCT AAGCACTAAA GCTCAAAAAT CAAGCGCAAA ACTAATAATT TTAGAAAAAG CTGCCCAACA ATTAGAAGAA GTTGGGCTTT AA
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Protein sequence | MVATYTPRIT NAYRFSIAPM LDCTDRHFRV IFRQVSRRSL LYTEMIVAKA LQHQKGRRLL DFDEIEHPIS LQVGGDNPKE LADAAKLAED WGYDEINLNL GCPSPRVQSG NFGACLMATP NQVAKCIEAM KNATQIPVTI KHRTGIDNFD SEEFLFSFVD QIAKAGADRF AIHARKAWLE GLNPKQNRTI PPLEYLKVKK LKLKRPELKI EFNGGLHTPE ECVKTLKIFD GAMVGRSAYS NPMLWQEMDS LIYGEDYFPV KASQVIQNLI PYAQKHLDNE GRLWDISKHL LQLVQAVPGA RAWRHNLSTK AQKSSAKLII LEKAAQQLEE VGL
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