Gene P9211_00001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_00001 
SymboldnaN 
ID5730853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp162 
End bp1355 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content33% 
IMG OID641284342 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001549885 
Protein GI159902541 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.284448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0167825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTT TCTGTTTCGT CGTTAAATTT GATTCGATGA AACTAGTATG CTCCCAATCC 
GAACTGAACT CTGCTCTCCA GCTTGTTAGC AGAGCAGTAG CTTCTCGCCC TACCCACCCT
GTATTAGCTA ACATCTTGCT AACAGCAGAT GCTGGTACAG GACGCTTAAG CCTTACAGGC
TTTGATCTAA ATTTAGGAAT TCAAACATCT CTAACCGCTT CAGTAGAAGT TAGTGGGGCT
ACAACCCTTC CTGCAAAGTT GTTTGGAGAG ATTGTTTCCA AACTTTCTAG TGACTCGCCA
ATAAATCTAG TAAGCGATGA ATTAGGAGAA AAAGTTAATT TAACGAGTAA AAGTGGTACT
TATCAAATGC GTGGTTTAAA TGCAGATGAT TTTCCTGAAT TACCTCTTGT TCAGACTGGA
GCTTCGTTGC AAATTAACCC TTTGATTTTT GCTAATGCTT TAAAAAGTAC GTTATTTGCA
AGTAGCTCTG ATGAATCAAA GCAAATTTTA ACAGGAGTTC ATTTAATTTT TGATGGAAAT
ATTCTTCAAG CTGCAGCTAC TGATGGTCAT CGTTTAGCTG TATTAAACTT GGAAGATGCT
ATTAACTTGA ACTCCTCTAC GAATTTAAAT ACTAATGATA AAATTGAAGT CACACTTCCT
GCTAAATCTC TTCGCGAAAT TGAAAGATTT ATTGGAAATT ATAAAAACGA GGAAAAAATT
AGTCTTTTTT ATGATAGCGG TCAAGTTGTA TTTACGGCAT TAAATCAAGT TGTTACAACA
AGAATATTAG AAGGAGATTA TCCAAATTAT AATCAATTAA TACCTGAATC ATTTTCGAAT
ATTTTAGAAT TTGATAGAAA ACCTTTTATA TCAGCTCTTG AAAGGATTGC TGTTTTAGCA
GATCAACATA ATAATGTTAT AAAAATTTCA AAAGAACCTT CTTCTGATTT AGTTAAAATA
ACAGCTGATG CTCAGGATGT TGGTAGTGGT GTTGAATCCA TTCCTGTTAA ATTTAATGGA
GATAATTTTC AAATTGCTTT TAATGTTCGT TATTTGTTAG AAGGATTAAG AGTTTTTGAA
GAAGATAAAA TTTGTTTACG TTGTAATTTA CCTACTACTC CTGCTATTTT GTCTTCTATA
GATGATCAAA ATACTTTTAT TTACCTTGTA ATGCCAATAC AAATTCGGTC TTAA
 
Protein sequence
MSFFCFVVKF DSMKLVCSQS ELNSALQLVS RAVASRPTHP VLANILLTAD AGTGRLSLTG 
FDLNLGIQTS LTASVEVSGA TTLPAKLFGE IVSKLSSDSP INLVSDELGE KVNLTSKSGT
YQMRGLNADD FPELPLVQTG ASLQINPLIF ANALKSTLFA SSSDESKQIL TGVHLIFDGN
ILQAAATDGH RLAVLNLEDA INLNSSTNLN TNDKIEVTLP AKSLREIERF IGNYKNEEKI
SLFYDSGQVV FTALNQVVTT RILEGDYPNY NQLIPESFSN ILEFDRKPFI SALERIAVLA
DQHNNVIKIS KEPSSDLVKI TADAQDVGSG VESIPVKFNG DNFQIAFNVR YLLEGLRVFE
EDKICLRCNL PTTPAILSSI DDQNTFIYLV MPIQIRS