| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1769 |
|---|
| Symbol | |
|---|
| ID | 5737621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1658219 |
|---|
| End bp | 1658989 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641284269 |
|---|
| Product | cobalt ABC transporter, inner membrane subunit CbiQ |
|---|
| Protein accession | YP_001549812 |
|---|
| Protein GI | 159906150 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.344315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTTTACACG GATCAATTCA TAGTCTGGAA CGAGATGCAT TTGTTGAAAG TCCGCTTCAC
AAAATAGATG CTAGAATAAA ATTAATATTC GTTTTTGCCG TAGTTTTGAC TGCAACAACA
TTTAACAATA TTTCAATGAT GATTTTAATG GAAATTTACA TATTATGTGT AATGCTATTT
TCAAAAATCC CCATTTTAAA TTTAATTAAA AAAATCATTA TGATAATTCC ATTTGGTGGA
TTTATAGTAT TATTTCAGCC TTTCATACGG GGAGAATCGG TAATATTTTA TATAGGAATG
CTTCCAGTAT ATGCTGAAGG ATTGGATTTT GGAATTTCGT TATTTTTAAA ATTTTTAGTG
TCGATATCAT CAGTAGTCCT ACTTTCTTCG ACTACGCCAA TGTATGAAGT AATAAATGCT
GGAAAAAGAC TTGGAATTCC AAGCATAATG TCCACGCTGC TTGGAATGAT GATAAGATAC
CTATTTGTAA TGTTTGATGT TTTAGAGTCC ACACTAAAAG CGCAGAAATC AAGAGCGCTT
AATCGGAAAA ATGTAAGCTA TAAAGATCTT TTAAATAACT TTGGATCATT AGTTGGGCTT
GTTTTTTTAA AGTCATACGA ACAAGGTGAA AGGACATATT TAGGAATGCT TTCGAGGGGA
TACTCAAAAG ATTCCAAAAT AAAAACATTG GGCCAAAAAA TTGGAATTAA TGATATTGTA
TTTTTGTCAG CGACCACAAT AGTATTATCC GTTGGAATAG TTTCTTTATA A
|
|---|
| Protein sequence | MLHGSIHSLE RDAFVESPLH KIDARIKLIF VFAVVLTATT FNNISMMILM EIYILCVMLF
SKIPILNLIK KIIMIIPFGG FIVLFQPFIR GESVIFYIGM LPVYAEGLDF GISLFLKFLV
SISSVVLLSS TTPMYEVINA GKRLGIPSIM STLLGMMIRY LFVMFDVLES TLKAQKSRAL
NRKNVSYKDL LNNFGSLVGL VFLKSYEQGE RTYLGMLSRG YSKDSKIKTL GQKIGINDIV
FLSATTIVLS VGIVSL
|
|---|
| |