| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1738 |
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| Symbol | dapF |
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| ID | 5737479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1634969 |
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| End bp | 1635802 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641284239 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001549782 |
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| Protein GI | 159906120 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTA CAAAAATGCA CGGTCTAGGC AACGATTATA TCTACGTAGA TGCAATTTCG
CAAAAAATTG AAAACCCAAA CGAAATTTCG AGATTCGTAA GCGACAGACA TTTTGGAATA
GGTTCAGATG GTCTTGTATT GATCCTCCCC TCAGATTTAG CTGACTTTAA AATGAGAATG
TTTAATTCAG ATGGTTCCGA AGCTGAAATG TGTGGTAATG CAATTCGTTG CGTTGGAAAG
TTCGTTTATG ATAAAAAAAT GACTGATAAA TCAACAATTA CTATTGAAAC ACTTGCAGGA
ATAAAAGTTC TTGAAATGAC AATCGAAAAT GACAAAGTAG TTTTGGTAAA AGTTGATATG
GGCGAACCAA TCTTAAAAGC AGAAACAATT CCTGTTTTAA GTGAAAAACA TCCTGTAATC
GATGAAGAAA TTACTGCAAA AGATTACTGC TATAATTTCA CCTGTGTTTC AATAGGGAAC
CCGCATGCAA TAACATATAT TGAAAATGTG GAAGAATTTC CGCTTGAAAA AATCGGTCCA
TTATTTGAAA TCCACGAAAA ATTCCCAAGA AAAACAAATG TTGAATTCGT TGAATTAATC
GATGATTCTA CAGTTAAAAT GAGAGTTTGG GAAAGAGGTG CTGGTGAAAC ACTTGCATGC
GGAACAGGCG CTTGTGCAGT CTTAGTTGCA TCAGTTTTAA AAGGTTACGT TGGTAGAAAA
GCAACAGTCA AACTTCTCGG TGGAGATTTA ACAATCGAAT GGAATGAGAG TGACAATCAC
ATCTACATGA CTGGTCCTGC AACAACAGTC TTTGAAGGAG AAATTGACAT TTAA
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| Protein sequence | MKFTKMHGLG NDYIYVDAIS QKIENPNEIS RFVSDRHFGI GSDGLVLILP SDLADFKMRM
FNSDGSEAEM CGNAIRCVGK FVYDKKMTDK STITIETLAG IKVLEMTIEN DKVVLVKVDM
GEPILKAETI PVLSEKHPVI DEEITAKDYC YNFTCVSIGN PHAITYIENV EEFPLEKIGP
LFEIHEKFPR KTNVEFVELI DDSTVKMRVW ERGAGETLAC GTGACAVLVA SVLKGYVGRK
ATVKLLGGDL TIEWNESDNH IYMTGPATTV FEGEIDI
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