| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1649 |
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| Symbol | |
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| ID | 5737741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1550239 |
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| End bp | 1551132 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 641284150 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001549693 |
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| Protein GI | 159906031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGTC AAAAAAAGAT TTTAAAAATA ACTGCTGATT CAAAAATTGC TGGAAACAAG
TTAATCGATG TTTTAAAGGA CAATTTTGAA CTTTCCAATA AAATGATAAA AAAATTTGAT
AAAGAAAAGA AAATTTTTGT AAATTCTAAA ATTATTTCCT TAAAATCAAA ATTAAAAGAA
AATGAAACTG TTTCTGTTGA AATCGATTGC GGAATTAATA ATATTGATCC AGAAGAACTG
CCATTAAACG TAATTTACGA AGATGACGAT TTATTGATTG TTGATAAACC AAAAAATATG
GTTGTTCACC CAACTAAAAA TGTATTATCA AAAACACTTG CAAATGCAAT TTCAAATCAC
CAGAAAATAA ATAATCAAAA CTACAAAATA AGATTTGTAA GCCGGCTTGA TATGGACACT
ACTGGACTTT TAATCATTGC AAAAAATTCA TATTCCCATC AACACTTGGC AAAACAGATG
GATGAAGGAA TTTTGGAAAA AATATATGTC GCAGTGGTAA ATGGACGTTT GGATTTAAAA
GAAGGGATTA TTGAAGATTC AATCGATTTA AATGACGACG GTATAAAAAG AGAATTATCC
AATTCTGGAA AAATTTCAAA AACTAAATAC AAAGTAATCG AAGAATTAAA AAATGCATCA
GTTCTTGAAA TAAACTTACT TACTGGCAGA ACGCACCAGA TAAGGGTTCA TTTATCAAGT
CTTGGAAATT ATATACTTGG GGACATCCTT TATGGAAAAA CTTCTAAGTT AATTGATAGA
CAAGCTCTTC ATTCGCATAT TTTAAGATTT ATTCATCCAA TTACAAAAGA AAGAAAGGAA
TTTACTTCAA AACTGCCAGA TGATATGGAA AATCTCATAA AAAATTTGAA ATAG
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| Protein sequence | MESQKKILKI TADSKIAGNK LIDVLKDNFE LSNKMIKKFD KEKKIFVNSK IISLKSKLKE
NETVSVEIDC GINNIDPEEL PLNVIYEDDD LLIVDKPKNM VVHPTKNVLS KTLANAISNH
QKINNQNYKI RFVSRLDMDT TGLLIIAKNS YSHQHLAKQM DEGILEKIYV AVVNGRLDLK
EGIIEDSIDL NDDGIKRELS NSGKISKTKY KVIEELKNAS VLEINLLTGR THQIRVHLSS
LGNYILGDIL YGKTSKLIDR QALHSHILRF IHPITKERKE FTSKLPDDME NLIKNLK
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