| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1646 |
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| Symbol | |
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| ID | 5737710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1544018 |
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| End bp | 1547263 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641284147 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001549690 |
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| Protein GI | 159906028 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGAG AGGATATAAA AAAGGTAATG ATTTTGGGCT CGGGCCCCAT TGTTATCGGA
CAAGCTGCGG AGTTTGACTT TTCCGGCTCA CAAGCTTGTA AATCTTTAAA GGAAGAGGGA
ATTTATACAA TTTTAGTAAA TTCAAACCCT GCAACCATTC AAACCGATAC AAATATTGCG
GACAAGGTCT ATTTGGAACC ATTGACCCCA AAAATATTGG AAAAAATCAT TGAAAAAGAG
CAGCCTGATG CAATTCTCCC AACAATGGGT GGTCAGACGG GTTTAAATCT TGCAATGGAA
CTTTCGAAAC GCGGAATCTT GGAAAAACAC GGCGTTGAAT TATTAGGTTC AACTGAAAGC
GTAATTGAAA CTTCAGAAGA TAGAGATTTA TTCAATAAAG CAATGGAAGA AATTAACCAG
CCCATTGCAA AATCTGCAGC TGTCCATAGT GTTGAAGAAG CAATTAAAGC TACCGAAGAA
CTCGGATACC CTGCAATCGT AAGACCTGCA TTCACACTTG GGGGAACGGG TGGTGGAATT
GCTACTAACG AAGAAGAATT AATTGAAATT ACGAAAAAAG GATTGAAATA CTCAATGATC
AGACAGGTTT TAATTGATCA GAGTCTTTTA GGCTGGAAAG AATACGAATA CGAAGTAATG
AGGGATAAAA ACGATACCTG TATTGTTGTA TGTAACATGG AAAATATCGA TCCAATGGGA
ATACACACGG GAGAAAGTAT CGTAACCGCA CCTTCACAGA CCTTAAGCGA TGAATTCCAC
CAAAAATTAA GAGATGCCTC ATTACAAATA ATCAGACACT TGAAAATTGA AGGTGGCTGT
AACGTTCAGT TTGCGGTAAA CCCTGAAATG ACTGATTACG TGGTAATTGA AGTAAACCCG
AGAGTTTCAA GAAGCTCTGC ACTTGCAAGC AAAGCAACAG GATACCCGAT TGCAAAAATC
GCTGCAAAAA TCGCAATTGG AAGAACACTC GATGAAATAC AAAACGACGT TACAAAAGAA
ACACCTGCAA GCTTTGAACC AACAATCGAC TATGTTGTGG TAAAAATTCC AAGATGGCCG
TTTGATAAAT TCAGAACTGT TGACAAAAAA CTTGGAACTT CCATGAAATC TACCGGAGAA
ATCATGGCAA TTGGAAGGAA TCTTGAAGAA GCCATTCAAA AAGCTGTTAG AAGTTTAGAT
ATTGGAAGAT TTGGATTAAT TGCAGACGGA AAAGACAAAG AATACTCAAA TTCTGAAATT
GTTGATATTT TAGAACATGC GACAGATGAA AGACTCTTTG TAATTGCTTA CGCACTCGAT
AAAGGGTGGA GTGTTGATGG AATTTGTGAA AGAACAGGAA TAAATCCATT CTTCATTGAA
AAAATCAAAA AAATTATCGA CTGTAAAAAA GAACTCGAAG TAATTTCAAG AATTCCTGTA
GATGACGAAA AATTAAAAGA AATCCTTTTA AAAGCAAAAT CATTGGGCTT TTCAGATGTT
CAAATCTCGA AAATATTTTC AAAAACTGAA AATGAAATAA GAGAACTTAG AAAAAGACTC
GATGTAATTC CAGTTTACAA GATGGTAGAC ACCTGTGCAG CGGAATTTGA AGCAAAAACA
CCATACTACT ACTCAGCATA CGAAAGATAC TTCGATGAAG AGCAGAATGA AAGCGTCTCC
ACAGACAGAA ACAAAGTAAT AATTTTAGGT TCTGGACCAA TTAGAATAGG TCAAGGGGTT
GAATTTGATT ATTCAACAGT TCACGCAATT TTTGCACTAA AGGAACTTGG AATTGAAGCG
ATTATTGTAA ACAACAACCC TGAAACTGTA AGTACTGATT ACGATACTTC GGACAAACTC
TACTTTGAGC CATTAGTATA CGAAGAAATA ATGAATATAA TTGAAAATGA AAATAAAAAC
GGGCAGTTAC TTGGAGTTAT CGTTCAATTT GGTGGACAAA CTGCAATTAA CCTTGCAATG
AAACTCTACA ATTCAGGAGT AAACATTTTA GGAACATCCC CACAATCAAT CGACCTTGCA
GAAGATAGAG ATCAGTTCAT ACACGTGCTT GAAAAATTGA AAATACCTCA AGCAGATGGT
GCAACTGCAT TTAGTGAAGA GCAAGCTCTT AAGGTTGTTG AAAAAATCGG ATACCCTGCA
CTTGTTAGAC CTTCATACGT ATTGGGCGGA CGTGCAATGC AGATCGTCTA CAACACTGAA
GATTTAAAAG ACTATATGAG GGAAGCAGTT AAAGTTTCGT CAGATCACCC GATTTTAATC
GATAGATTCT TAGAAGAAGC TATTGAAGTC GATGTTGATG CAGTGTGCGA TGGAGAAAGT
GTATTTATTG GCGCAATTAT GGAACATATT GAAGAAGCTG GAATCCATAG TGGAGACAGT
GCTTGTGTAA TTCCGCCTCA AACTCTCTCA AAAGAAGTAA TTGAAAAAAT TGCAGAACAT
ACAACCAAAC TTGCACTCGA ACTTGGAGTA ATTGGTTTAC TAAATATCCA GTACGCTGTA
AAAGACGGTG TTGTTTATAT TATTGAAGCA AACCCGAGAG CTTCAAGAAC CATCCCCTAT
GTGAGCAAAT CAGTTGGAGT TCCACTTGCA AAAATTGCAA CAAATGCAAT AATGGGCAAA
AAATTAAAAG AAATGGGATA CTCAGGACTT GCAAAAGCAA AATACGTGAG TGTAAAAGAA
GCAGTATTTC CATTTTTAAA ACTTCCAGGA GTAGACCCAG TATTAAGCCC AGAAATGAAA
TCAACCGGTG AAGCAATCGG AATTGACCAG GACTTTGGAA AAGCATTTTA CAAATCCCAG
CTTTCTGCAA ACATGGAACT TCCAACATCG GGAACTGTCT TTATAAGCGT AAGAAATAGG
GATAAGGACA ATATTACAAA AATTGCCAAA AAATACCACG ATTTAGGCTT TGAAATTGTT
GCTACAAAAG GAACTGCAAG AGAACTTCGG TTATTTGACA TTCCAGTAAG GGAAGTCAGC
AAAATTTCAG AAAGCATGCA AAACAGTGTT CTCGATTTAA TGCAGAAAGG AGAAGTCGAT
TTAATAATAA ACACGTCTTC AGGAGATAAA GCTAAAACTG ATGGATACTA CATCAGAAGA
GCTGCAGTTG AATTGAACAT TCCTTGCATG ACCACATTAC AAGGAGCATA CGCTGCAATC
AAAGCTATTG AAGCAATTAA ATCTGGAGAA CTTGGAGTTT ATTCATTGAA TGAACTTGAA
AATTAA
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| Protein sequence | MKREDIKKVM ILGSGPIVIG QAAEFDFSGS QACKSLKEEG IYTILVNSNP ATIQTDTNIA
DKVYLEPLTP KILEKIIEKE QPDAILPTMG GQTGLNLAME LSKRGILEKH GVELLGSTES
VIETSEDRDL FNKAMEEINQ PIAKSAAVHS VEEAIKATEE LGYPAIVRPA FTLGGTGGGI
ATNEEELIEI TKKGLKYSMI RQVLIDQSLL GWKEYEYEVM RDKNDTCIVV CNMENIDPMG
IHTGESIVTA PSQTLSDEFH QKLRDASLQI IRHLKIEGGC NVQFAVNPEM TDYVVIEVNP
RVSRSSALAS KATGYPIAKI AAKIAIGRTL DEIQNDVTKE TPASFEPTID YVVVKIPRWP
FDKFRTVDKK LGTSMKSTGE IMAIGRNLEE AIQKAVRSLD IGRFGLIADG KDKEYSNSEI
VDILEHATDE RLFVIAYALD KGWSVDGICE RTGINPFFIE KIKKIIDCKK ELEVISRIPV
DDEKLKEILL KAKSLGFSDV QISKIFSKTE NEIRELRKRL DVIPVYKMVD TCAAEFEAKT
PYYYSAYERY FDEEQNESVS TDRNKVIILG SGPIRIGQGV EFDYSTVHAI FALKELGIEA
IIVNNNPETV STDYDTSDKL YFEPLVYEEI MNIIENENKN GQLLGVIVQF GGQTAINLAM
KLYNSGVNIL GTSPQSIDLA EDRDQFIHVL EKLKIPQADG ATAFSEEQAL KVVEKIGYPA
LVRPSYVLGG RAMQIVYNTE DLKDYMREAV KVSSDHPILI DRFLEEAIEV DVDAVCDGES
VFIGAIMEHI EEAGIHSGDS ACVIPPQTLS KEVIEKIAEH TTKLALELGV IGLLNIQYAV
KDGVVYIIEA NPRASRTIPY VSKSVGVPLA KIATNAIMGK KLKEMGYSGL AKAKYVSVKE
AVFPFLKLPG VDPVLSPEMK STGEAIGIDQ DFGKAFYKSQ LSANMELPTS GTVFISVRNR
DKDNITKIAK KYHDLGFEIV ATKGTARELR LFDIPVREVS KISESMQNSV LDLMQKGEVD
LIINTSSGDK AKTDGYYIRR AAVELNIPCM TTLQGAYAAI KAIEAIKSGE LGVYSLNELE
N
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