| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1630 |
|---|
| Symbol | |
|---|
| ID | 5737543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1524528 |
|---|
| End bp | 1525271 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641284131 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001549674 |
|---|
| Protein GI | 159906012 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAT TTAATATCTC CATAATTTTA ACAGTTTTTT TAATTTTAAT TTCAGGATGT
CTTTCAAATT CAGAACATAT TGAAAAAGAA ACTATGGTGG TTGGGGTAAC TCCTGAAATT
TATCCTATAA ACTACATGGA TGCTGGAGTA CACAGTGGAT TTGAAATCGA ATATATCACT
GAAATTGCGG AAAGAATGGA TATGAAACCA GAATTTCGAA TTTATGAATT CATGAACCTT
TTAAATGCTG TGGAAACAAA TCGGGTTGAC TGTGCAATAT CGTTAATCAC TGTAACTCCT
GAACGGGAAG AATTAGTGAT ATTTTCAAAA TCTTATCTAA ATACGACGAG TATCTGGGTT
GTTGATAGAA ATACCGGCGC TGAAACTCTG GATAACGGTA CTATTGGTGT TATAAAAAGT
ACGGTGCAGG ATGGATGTGC GATACGCCTT AAGGAAAAAC AAGAATTTAC GATCTACAAA
TATAGGACAG CTGCAGAACT GGAACGGGCA TTTGATCAAG GAAAAATCAA TGCAATGATA
GTTGACAAAA TATACTTTGA ATATGTACTT CATCCTGAAA ACAACAATTT AACGAGCATT
TTTGAATGCC CGCTTGGTGA AAATATATCA ATTGCAGTAA ATAACGAAAA TACTGAATTA
TTAAACGATA TTAATAACAT AATAACTGAA ATGGACGAAG ATGGAACGTA CGATAACTTA
AAAAATAAGT GGTTGTCGAA TTAA
|
|---|
| Protein sequence | MLKFNISIIL TVFLILISGC LSNSEHIEKE TMVVGVTPEI YPINYMDAGV HSGFEIEYIT
EIAERMDMKP EFRIYEFMNL LNAVETNRVD CAISLITVTP EREELVIFSK SYLNTTSIWV
VDRNTGAETL DNGTIGVIKS TVQDGCAIRL KEKQEFTIYK YRTAAELERA FDQGKINAMI
VDKIYFEYVL HPENNNLTSI FECPLGENIS IAVNNENTEL LNDINNIITE MDEDGTYDNL
KNKWLSN
|
|---|
| |