Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1526 |
Symbol | |
ID | 5737660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1425044 |
End bp | 1425754 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641284027 |
Product | metallophosphoesterase |
Protein accession | YP_001549571 |
Protein GI | 159905909 |
COG category | [R] General function prediction only |
COG ID | [COG1407] Predicted ICC-like phosphoesterases |
TIGRFAM ID | [TIGR00024] putative phosphoesterase, SbcD/Mre11-related |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0019874 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGTAA ATGGGCATGA AATCCAGTTT AAAGATAATG CAGTATTTTT AGAAGAAAAT AAAACATTGA TACTTGCAGA TGTCCACGTT GGAATGGAAG AATTTATTCG ACGAACTGGT GTTTTATTTC CATTAAACGA AAAAAAAGAA CTCCTAAAAA GGCTCAAAAA TTTAATAATT GAGTTCAAAC CTGAAAAAGT AGTATTTTTG GGAGATTTCT TGCACCACTT TCAAAAAGTT CCATACAAAG TTTACGAAAC AGTTCGGGAA TTGAATTCCC TTTTAAAAAA TCATGAAATC ATTGTAATTC GCGGAAATCA CGACATAATG CTCGAATACA TACTTAAAGA AAATACTGAT TTTAAAATTT TAGATTATTT GCTTGAATGT AATATTTTAA TGGTTCACGG GGATAAAACA TTTGACGTTG ATTTTGAATT TAATCTTTTA ATTATGGGCC ATGAACATCC GGTTTTAGAA ATAAATAAGC AAAGGTTTCC AAGCTACCTT GAAATAGTTC AAAATGACTT TGAAATACTT GTAACTCCCG CATTTTCAAA CATTGCGTCA GGTGTTAAAA TAAACGAACT TGAAAGCAAC TTCATGTCAC CATATTTAAA AAAAGTTAAA AAAGAAGACA TTTTTCCGAT TGTTATTGGA GAAGAAGTTT TGAAATTTCC CGATCTTTCA AAACTCGAAA AATTCATTTA A
|
Protein sequence | MEVNGHEIQF KDNAVFLEEN KTLILADVHV GMEEFIRRTG VLFPLNEKKE LLKRLKNLII EFKPEKVVFL GDFLHHFQKV PYKVYETVRE LNSLLKNHEI IVIRGNHDIM LEYILKENTD FKILDYLLEC NILMVHGDKT FDVDFEFNLL IMGHEHPVLE INKQRFPSYL EIVQNDFEIL VTPAFSNIAS GVKINELESN FMSPYLKKVK KEDIFPIVIG EEVLKFPDLS KLEKFI
|
| |