| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1377 |
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| Symbol | |
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| ID | 5738004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1278644 |
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| End bp | 1279807 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641283875 |
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| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit |
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| Protein accession | YP_001549422 |
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| Protein GI | 159905760 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00118672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATG AAATGTATTA TGTACAGGCT TCTGACCCGG CAATACTCGA AAAAGGAGAA
TGTGGTGGTG CAGTTACTGC ACTCTTCAAA TATCTTTTAG ACAAGGGTAT TGTAGATGGT
GTTTTAGCTT TGAAAAAAGG TGTTGATGTA TATGACGCAA TTCCAACGTT TGTTACATCT
TCAGAAGATT TGTTGAGTAC TGCAGGTTCT CTACACTGCG CTCCAACCAT GTGGGGCGGA
ATTATAAAAG AATACTTACA AGATGCAAAA ATTGCAGTTC CGGTAAAACC TTGCGACATG
AGGGCAATCG TTGAACTTGC AAAAAGAGCA CAGATTAATC TTGATAACGT CTACATGATT
GGATTGAATT GCGGTGGAAC GGTTCCCCCA AAAACTGCAA TGGAAATGAT AAAATTATTT
TATGAAGTAG ATCCAAAAGA CGTTGTAAAA GAAGAAATCG ACAAGGGTAA GTTTATAATC
GTTATGAAAG ACGGATCCCA CAAAGAAGTT AAAATGCACG ATCTCGAGGA CAATGGCTAC
GGAAGAAGAG TAAACTGCCA GAGATGTGAC GAAAAAATCC CAAGGAAAGC AGATATTGCT
GCAGGAAACT GGGGTGTAAT CGGAGAAGAT GCTGGAAAAT ATACCTTCAT GGAAGTATGC
ACTGAAAAAG GTAAGCAATT ACTCAAAGAT GCAGAAAAAG ATGGTTATGT TAAAACAAAA
GCTCCAAATC CAAAAGGACT CGAAATAAGG GCAAAAGTAG AAAGCTCAAT GTTAAAAATG
GGCGAAGATT ACAAAAATAA ATGGTTGGAA GAAGAATATC CAACAATTGA AGAATGGAAC
AGGCAATGGA ATAAGTGTAT AAAATGCTAC GGCTGTAGGG ACGTATGTCC AGTATGTTTC
TGTAGAGAAT GTGCGCTCAA TGCTGACTAC ATCGATACAG GATCAATACC GCCTAATCCA
ATAATGTTTC AGGGAGTTAG AATGTCACAC ATGGCATTTA GCTGTGTAAA CTGTGGACAG
TGTGAAGACG TATGCCCTAT GGAAATTCCA GTTGCAAGAA TATTCCACAA AGTTCAGGAA
AAAACAAGAA AAGTGCTTGG TTACAGACCC GGTGTCGACG ATGAAGCACC GCCTGCTCTT
GGAGGCTCAT GCCCAACCCA ATAA
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| Protein sequence | MSNEMYYVQA SDPAILEKGE CGGAVTALFK YLLDKGIVDG VLALKKGVDV YDAIPTFVTS
SEDLLSTAGS LHCAPTMWGG IIKEYLQDAK IAVPVKPCDM RAIVELAKRA QINLDNVYMI
GLNCGGTVPP KTAMEMIKLF YEVDPKDVVK EEIDKGKFII VMKDGSHKEV KMHDLEDNGY
GRRVNCQRCD EKIPRKADIA AGNWGVIGED AGKYTFMEVC TEKGKQLLKD AEKDGYVKTK
APNPKGLEIR AKVESSMLKM GEDYKNKWLE EEYPTIEEWN RQWNKCIKCY GCRDVCPVCF
CRECALNADY IDTGSIPPNP IMFQGVRMSH MAFSCVNCGQ CEDVCPMEIP VARIFHKVQE
KTRKVLGYRP GVDDEAPPAL GGSCPTQ
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