| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1376 |
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| Symbol | |
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| ID | 5737720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1276586 |
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| End bp | 1278610 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641283874 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001549421 |
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| Protein GI | 159905759 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0754319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAA ACTTCATTCA TACGATTTGC CCATATTGCG GAACAGGCTG CGGTGTGGAC
CTCGTAGTAA AGGATGGGAC ACTTGTTGGG ACCAATCCTT TTAAAAGACA CCCTGTAAAC
GAGGGAAAAA CCTGTATTAA AGGTAGTTAT TGTCACGAAT TTGTACACCG TGATGATAGG
TTGAAAACTC CATTGATCCG AAAAAATGGA GAATTGGTTG AAGCATCATG GGATGAAGCA
CTCGAACTGA TTTCAGGTAA GTTAAAAAAT TATTCCCCTG AAGAAATCGG ATTTTTTTCA
TCTGCAAGAT GTACCAATGA AGACAACTAT GTATTTCAAA AATTTGCAAG AACAGTAATG
AAAACTAATA ATGTTGATCA CTGTGCGAGA CTTTGACACT CGGCAACTGT GGTCGGTTTA
GGGCAAGCCT TTGGTTCAGG TGCTATGACA AATTCAATTT CTGATATAGA AGATGCAGAC
TGTATATTCA TAATCGGTTC AAATACGTTT GAACAACACC CTTTGATTGC GAGAAGAGTT
GTTCGCGCAA AAGAAAAAGG AACTAAAATA ATTGTAATAG ACCCAAGATA CACACCAACT
GCAAAACAGG CTGATTTGTA CTTACAGTTA TTACCGGGTA CAAATATTGC AGTACTAAAT
GCAATAATGC ATGTAATTGT GAAAGAAAAT TTGGTCGATG AAGAATTCAT CAAAAATAGG
ACAAAAGGAT ACGAAGAACT TAAAAAAACG CTTGAAACTT ATACTCCTGA GTATGCATCA
AAATTATCAG GTGTGGCTCC GGAATTAATT GTCGAAGCTG CTAAAATGTA TGGTAGTGCA
GGTGCAGCAT CGATACTTTA CTGTATGGGT ATAACGCAGT TCACAACCGG TGTAAACAAC
GTAAAATCTT GCTGTAACTT GGCAATGATT ACCGGAAATA TTGGAAAACC TGGAACTGGT
GTAAATCCAC TAAGGGGTCA GAATAACGTT CAAGGGGCCT GTGACATGGG TGCACTTCCA
AACGTATTCC CTGGCTATCA GGCAGTTCCA GCAAACCATG AAAAATTTGC AGAAGCATGG
AATACATCTG TTGATCCAAA TGTCGGTCTT TCGATTCCAG ATATGCTTGC AAAAGCTGGA
GAACAGGTTA AATGTATTTA TGTGCTGGGT GAAAACCCAA TGGTATCAGA CCCAGACATT
CACCACGTGG AGCATGCGTT GAAAAGCCTT GATTTATTGA TAGTACAGGA CATTTTCTTA
ACAGAAACTG CACAAGTTGC AGATGTAGTC TTACCTGGAG CTTCTTGGGC TGAAAAGGAT
GGAACTTTCT CAAACACTGA AAGAAGAATC CAAAAAATCA ATAAAGCAGT AGATTCTCCG
GGTGAAGCAA TTGCTGACTG GAAAATCGTA AAAATGATTG CTGAAAAGAT GGGTCAAGGA
GAATTATTTA ACTTCAACAC TCCTGAAGAA GTATTCCAAG AAATTGCAAA AGTAACTCCT
CAGTATGCGG GTGTAACTTA TGAAAGAATT GGTGTAGATG GACTCCACTG GCCATGTAAA
ACTTGTGAAG ACCCTGGAAC TCCAATTCTC CACTGTCAAA AATGTTTAAC TCCAGATGGA
CTTGGAAACA TCTTTGCAAT AGACTATGCA GATCCAGACG AAATGGCAGA TTCAGAATAC
CCAATGACCC TTACAACCGG TAGGATCATT TTCCACTACC ACACCGGAAC AATGACCAGA
AGAAGTAAGC ACATGGCTGA TGAAATAAAC GAAGGATTTG TTGAAATTCA TCCAGAAGAT
GCCAAAAATA TGGGAATTAA AAATAAACAG AAAGTCAAAG TTTCAACCCG AAGGGGCGAA
GTCGTTGTAA ATGCGAAAGT AACACCAAAT ATTAAACAAG GTGTTGTATT TATGCCATTC
CACTTTGCAG AAACTGCAGC TAACATCTTA ACAAATCCTG CTCAGGATCC AAACTGTAAA
ATCCCAGAAT ACAAGGTATG TGCTGCAAAG GTGGAGAAAA TATAA
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| Protein sequence | MELNFIHTIC PYCGTGCGVD LVVKDGTLVG TNPFKRHPVN EGKTCIKGSY CHEFVHRDDR
LKTPLIRKNG ELVEASWDEA LELISGKLKN YSPEEIGFFS SARCTNEDNY VFQKFARTVM
KTNNVDHCAR LUHSATVVGL GQAFGSGAMT NSISDIEDAD CIFIIGSNTF EQHPLIARRV
VRAKEKGTKI IVIDPRYTPT AKQADLYLQL LPGTNIAVLN AIMHVIVKEN LVDEEFIKNR
TKGYEELKKT LETYTPEYAS KLSGVAPELI VEAAKMYGSA GAASILYCMG ITQFTTGVNN
VKSCCNLAMI TGNIGKPGTG VNPLRGQNNV QGACDMGALP NVFPGYQAVP ANHEKFAEAW
NTSVDPNVGL SIPDMLAKAG EQVKCIYVLG ENPMVSDPDI HHVEHALKSL DLLIVQDIFL
TETAQVADVV LPGASWAEKD GTFSNTERRI QKINKAVDSP GEAIADWKIV KMIAEKMGQG
ELFNFNTPEE VFQEIAKVTP QYAGVTYERI GVDGLHWPCK TCEDPGTPIL HCQKCLTPDG
LGNIFAIDYA DPDEMADSEY PMTLTTGRII FHYHTGTMTR RSKHMADEIN EGFVEIHPED
AKNMGIKNKQ KVKVSTRRGE VVVNAKVTPN IKQGVVFMPF HFAETAANIL TNPAQDPNCK
IPEYKVCAAK VEKI
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