| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1311 |
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| Symbol | |
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| ID | 5737482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1219340 |
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| End bp | 1221175 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641283806 |
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| Product | DNA-directed RNA polymerase subunit B' |
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| Protein accession | YP_001549356 |
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| Protein GI | 159905694 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAAAGC AGACAAATGT ATATGTTAAC GGGAAATTGA TCGATACCAC AGAAGACCCT
GAAACACTTG TTAAAAACTT AAGGGAAAAC AGGAGAAGTG GAAAATTATC ACCAAGTACG
TCAATTTCAT TCAATGAAGA GAGCAACGAT GTGCACATTT CAACCGATGG TGGAAGGGCT
GTAAGACCAT TAGTTGTAGT TGAAAACGGT GCTTCAAAAT TAACACAAGA ATTACTCGAA
AAAGTAGATG CTCAAGAATT AACTTTCCAT GAATTAGTTA ATTCAGGTGT TATTGAATAT
TTAGATGCTG AAGAAGAAGA AAATGCAAGA ATTGCGATGT ACGAAGATGA AGTAACTGAA
GAAAATACAC ACGTTGAAAT CGACCCTCTT GTTATTTTAG GTATCGGTGC AGGTGTTGCT
CCATACCCAG AGCACAATTC AGCTCCAAGG ATTACGATGG CTGCTGCGAT GAGTAAACAG
TCACTTGGAA TTCCTATGGC AAACATAAAA TGGAGAATGG ATACAAGAGG ACACTTACTC
CACTACCCAC AAGTTCCACT TGTAAGAACA AAACACCAGG AAATCTTAGG ATTTGACAAA
AGACCTGCTG GACAAAACTT CGTTGTAGCA GTTATGAGTT ACGAAGGCTA CAACATGGAG
GATGCATTCA TCATCAACAA AGCATCCCTT GAAAGAGGTC TTGGTAGAAG TACATTCTTT
AGAAGCTACG AAAGCTTTGA AAAAAGATAC CCTGGAGGAC AGCTCGATAA ATTCGAAGTT
CCTGAAAAAG GAGTTAGGGG TTACAGGGCT GAAGAAGCTT ACAGAAACTT AGGTGACGAT
GGTTTAATTG ACCTTGAATC CGAAGTAAGA TCTGGAGATG TAATATTAGG AAAAACTTCA
CCTCCAAGAT TCTTAGAAGA ACAGGAAATC ACCCTTCAAA CAAAATCACA GAGAAGAGAC
ACTTCCGTTA CAATCAGACA CGGGGAAGAA GGAATCGTTG ACCTCGTAAT TTTGAGTGAA
ACAAAAGAAG GAAACAGACT TGGAAAAGTT AGAGTTAGAG ATTTAAGAAT TCCTGAGTTT
GGTGACAAAT TCGCATCAAG ACACGGTCAG AAAGGGGTTA TTGGACTTAT CGTTCCACAA
GAAGACCTTC CATACACCGA AGATGGAGTA ATTCCAGATT TAATCATCAA CCCGCACGCG
ATTCCCTCAA GGATGACTAT CGGACAGGTT CTTGAAATGA TTGGTGGTAA AGTTGGTTCA
TTAGAATGCA GAAGAATTGA CGGAACAATT TTCAGCGGCG AAAGCGAATG GAAATTAAGA
GAAGGCCTTG AAAAATACGG CTTTGAACAC CATGCAAAAG AAGCAATGTA CGATGGAAAA
TCCGGTAGAA AATTAGAGTG CGATATTTTC GTTGGAATTG CATACTACCA GAAATTACAC
CACTTAGTTG CTGGAAAAAT CCACGCAAGA AGTAGGGGAC CAATCCAAGT TCTTACAAGG
CAGCCTACAG AAGGTAGAGC AAGAGAGGGA GGTCTCAGAT TTGGAGAAAT GGAAAGAGAT
GTGCTAGTTG CCCACGGTGC TGCAATGCTC CTTAAGGAAA GACTTCTCGA TGAATCAGAC
CCTCACGAAG ACTACGTCTG TGCAAAATGT GGTGAAATTG CAATCTTCGA TTACAAGAGA
GGCATGAAAT TCTGTCCAGT TTGTGGTGAA TCAGAAGACA TTCAAGATAA CAGAAAGATC
CCACCTGTAA AAATTGCTTA TGCATTCAAA TTATTGTTGG ATGAGCTTAA GAGTATGGGA
ATCGATCCAA AATTAGAATT AAAAGACAGA GCATAA
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| Protein sequence | MEKQTNVYVN GKLIDTTEDP ETLVKNLREN RRSGKLSPST SISFNEESND VHISTDGGRA
VRPLVVVENG ASKLTQELLE KVDAQELTFH ELVNSGVIEY LDAEEEENAR IAMYEDEVTE
ENTHVEIDPL VILGIGAGVA PYPEHNSAPR ITMAAAMSKQ SLGIPMANIK WRMDTRGHLL
HYPQVPLVRT KHQEILGFDK RPAGQNFVVA VMSYEGYNME DAFIINKASL ERGLGRSTFF
RSYESFEKRY PGGQLDKFEV PEKGVRGYRA EEAYRNLGDD GLIDLESEVR SGDVILGKTS
PPRFLEEQEI TLQTKSQRRD TSVTIRHGEE GIVDLVILSE TKEGNRLGKV RVRDLRIPEF
GDKFASRHGQ KGVIGLIVPQ EDLPYTEDGV IPDLIINPHA IPSRMTIGQV LEMIGGKVGS
LECRRIDGTI FSGESEWKLR EGLEKYGFEH HAKEAMYDGK SGRKLECDIF VGIAYYQKLH
HLVAGKIHAR SRGPIQVLTR QPTEGRAREG GLRFGEMERD VLVAHGAAML LKERLLDESD
PHEDYVCAKC GEIAIFDYKR GMKFCPVCGE SEDIQDNRKI PPVKIAYAFK LLLDELKSMG
IDPKLELKDR A
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