Gene MmarC6_1227 details

Gene Information

• Locus tag: MmarC6_1227
• ID: 5738372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 1144814
• End bp: 1145386
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641283722
• Product: ZPR1-related zinc finger protein
• Protein accession: YP_001549272
• Protein GI: 159905610
• COG category: [R] General function prediction only
• COG ID: [COG1779] C4-type Zn-finger protein
• TIGRFAM ID: [TIGR00310] ZPR1 zinc finger domain; [TIGR00340] ZPR1-related zinc finger protein

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAC AATGCAATGT AATGGACTGC CCAATCTGCG GAAAAGAGGA TTCATTAAAA 
ATTATTACTC AGGAACTAGA AATCCCTTAC TTTGGAAAAG TTATCGAAAC CACGATATTA 
TGTGAATCAT GCAAATACAA AAAAAGCGAT ATATTCCCCG TAGATGTAAA AGAACCAAAA 
AGATATACTT TAAAGGTTGA AGACGAATAT GATTTGAACA AACGGGTTAT AAGAGGATCA 
TCAGGTCACA TTTCAATACC TGAATTTGGA TTTGAAGTGT CCCCGGGCCC AGCATCAGAA 
GCATACGTTT CAAATGTTGA AGGAGTTTTG ACTCGAATGG AAGATGCAAT AAAAACTTTA 
ATGTCGTGGG TCGAAAGCGA AGATGAAAAG AAAAAAGCAG AAGAATTGAT CGAAAAGTTA 
GAACATGTAA AACTTGGAAA AGAAAAAATA ACCTTAATCA TCGAAGATCC GCTCGGACAC 
AGTGCAATAA TTGGAGATGA CGTAAAAGAG GAAATTTTAA CAGAAGATGA GGTAGCTTTA 
TTAAGTGATA ATACTATTAT TATGGATAAA TAA 

 

Protein sequence

MEKQCNVMDC PICGKEDSLK IITQELEIPY FGKVIETTIL CESCKYKKSD IFPVDVKEPK 
RYTLKVEDEY DLNKRVIRGS SGHISIPEFG FEVSPGPASE AYVSNVEGVL TRMEDAIKTL 
MSWVESEDEK KKAEELIEKL EHVKLGKEKI TLIIEDPLGH SAIIGDDVKE EILTEDEVAL 
LSDNTIIMDK