Gene MmarC6_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1188 
Symbol 
ID5738063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1115739 
End bp1116542 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content36% 
IMG OID641283682 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001549233 
Protein GI159905571 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.765639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATTT CACTAATGGG TTATACTATA TCTATAGATC TGTTTTTAAT TGTTAAGGCT 
ATTTTGGTAC TTTTTCTAGG ATACTTGGCT GTAAAAATTG TATCAGGAAT GTTAGAAAAA
GGGGCTAAAA AAAGCAAGAT CCCAGAACTG GTTTCTGAAT TTGTTATTAA ACTATTTAGC
GCAATACTGT ATATATTTGT GATATTACTT GCAGTAGGTC TTTTTGGTGT TGAAACAGGG
CCAATAATTT TGGGACTTTC CGCATCGCTT GGCCTAATTT TGGGTTTTGG TTTACAAGAT
ACACTTACAA ACTTAACATC TGGCCTTTGG ATTGCAGTTA TGAGGCCACT TGATAAAGGG
GAAACTGTTC AAATAGGTGG AATGACTGGA AACGTTGTTG AAGTTGGAAT AATGGCAACT
AAACTTTTAA CACCGGACAA TGTAGTTATT ACACTTCCAA ATAAGCTAGT TTGGGGAAGT
CCGATAACTA ATTACACGAG AATGGACTTA AGAAGAGTAG ACATTGCGGT TGGAGTTAGC
TATGGTGAAA ATTTAGACAA TGCAGTATCT AAAGCACTAG AACTTATTTC TGGACATCCT
TTAGTATTAA AAGATCCTGC ACCCATGGCT GCTATAACTG GTCTAGGCAG TTCTTCAGTA
GATTTACAGC TTAGGGCTTG GACAAAAACC AGCGATTACT GGACTGTAAA AGGAGATCTT
ACAAAAGGAA TCTACGAAAA ATACGGAAAA GAGGGTATCG AAATTCCATT CCCACAAATG
GATGTACATA TCCACAAATA TTAA
 
Protein sequence
MPISLMGYTI SIDLFLIVKA ILVLFLGYLA VKIVSGMLEK GAKKSKIPEL VSEFVIKLFS 
AILYIFVILL AVGLFGVETG PIILGLSASL GLILGFGLQD TLTNLTSGLW IAVMRPLDKG
ETVQIGGMTG NVVEVGIMAT KLLTPDNVVI TLPNKLVWGS PITNYTRMDL RRVDIAVGVS
YGENLDNAVS KALELISGHP LVLKDPAPMA AITGLGSSSV DLQLRAWTKT SDYWTVKGDL
TKGIYEKYGK EGIEIPFPQM DVHIHKY