Gene MmarC6_1180 details

Gene Information

• Locus tag: MmarC6_1180
• ID: 5738484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 1106031
• End bp: 1106633
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 641283674
• Product: hypothetical protein
• Protein accession: YP_001549225
• Protein GI: 159905563
• COG category: [S] Function unknown
• COG ID: [COG2029] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 0.947621
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TCGATTTTGA TACAATTTCT GCAATTATTT TAGAAGAATT TAAAACATAT 
TCTGGAGAGG AAATTGAACC TCTCTGGGCA TTTAAAACAT TTGATGTTCA AAAAGATAGT 
ATTGTTGGAT TTATTGGCCC AATGAATGTT AAAATAGAAA ATATGAAAGA TTTAAAAGAT 
GTTAAAGAAG AAAAAGACAT AGCAATTCCA ATACAATCAT CAGAAGCCAT AAACTTTATT 
GTCGAACACT TTGATAATCC GGATTTAAAA ATGACATATT TAAGACAGAG AATTCTCGTA 
TTAATTGCAA AAGATGTAAT TGAAAATCAT TCCAATTTAA AACTGAAAAA ATCTGGAGAT 
GACCTTTATC TTGATGAAAA AAAATTATCG GTGTGTATTG CATGCAGGGG GATAAGTTCT 
GGAAAAATCC ACCTTGGAAT AAATATAAAA AGTGATTCTG TTCCGCCGCA CGTTTCTGCA 
ATAGGGTTAG AAGATATGGA AATTGAAAAT GCTTTTGAAA TTATGGAAGA AATTGCAATT 
GAATATGCAA AAGAAATGTC AAAAATTGAA AAAGATATTA GAAAAACGCT TCCTTTGTTT 
TAA 

 

Protein sequence

MKKIDFDTIS AIILEEFKTY SGEEIEPLWA FKTFDVQKDS IVGFIGPMNV KIENMKDLKD 
VKEEKDIAIP IQSSEAINFI VEHFDNPDLK MTYLRQRILV LIAKDVIENH SNLKLKKSGD 
DLYLDEKKLS VCIACRGISS GKIHLGINIK SDSVPPHVSA IGLEDMEIEN AFEIMEEIAI 
EYAKEMSKIE KDIRKTLPLF