| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1178 |
|---|
| Symbol | pheS |
|---|
| ID | 5738229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1103429 |
|---|
| End bp | 1104937 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641283672 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_001549223 |
|---|
| Protein GI | 159905561 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAAC TTCACAATGA TGAGAAAAGA TTATTAAAAG CATTTCAAGA ATCCAATGAA
AAAACGATGA ATTTAGAAGA ACTTTCAAAA TATATTGAAA AAGAAAAAGT CATGAGAGCA
GCATTCTGGC TTTCAGGACG AGATTTTCTT GAAATTATTG AAAATAAAAC CAAGATGTGT
GAATTAACCG AACTTGGTAA AAAATCTTTA GATTCTGGAA TTCCTGAGAG AAAAGTTGCA
AATTATATCA AAGAAAATAA TTTAGAATCA ATCCCAATAA AAGACCTTTC AAAAATTTTA
GAAAAGGATG AAACAGGGGC GGCACTTGGT AATTTAAAGA AAAAGGACTT AGTTACTATC
GATAAAGGAA ATATCGTATT TAAAAATTTA GATTACGAAG ATATCGAAGA AGAACTGTTA
AAAAAAGTTT TGATGGATTT TAATTTATCA AATTATTCTG AAGATGAAGT TAAAATAATT
GAAAACCTGA AAAAAAGAGG TTTTTTAAAA ATAAACGAAG TAGTTGATAG AAGTTTTGAA
CTTAAGAGTG CAGGAATTGA TTTTATTAAA AATACAATTG AAATAAAGGA AGAAATCACC
CAGCTTACAA GAGAAATGAT TGTAAGTGGA AAATGGAAAG ATTATACAAT CAGACCATAC
GATGCAAAAA TCCCAACAGA AGAAATTTAC CCTGCAAAAG CGCACCCGAT GTCAAAAATA
ATTCAGGAAG TAAACGACGT TTTGATATCA ATGGGTTTTA AAGAAGTAAA AAGCCAGATT
GTCCAGACGG AATTTTGGAA CTTCGATACG TTATTTGAAC CTCAAGACCA CCCTGCAAGA
GATATGCAAG ATACATTCTT TGTAAAATAT CCGAACACCG GAAAAGTTCC AAAAGATTTA
CTTGAAAAAG TAAAAGGAAT TCACGAATGT GGAACTATTG GTAGCGAAAA AATTTCAAAA
GGCTGGTGCT ACAAATTCGA TGAAAAAGTT TCTGAAAGAA CGGTTTTAAG AACGCATACA
ACCGTTTCAT CGATAAAATA TTTAGCATCA CTTTCAGAAA GTGAAAGAGA AAATGCACAA
AAAGTATTCT GCATCGACAG AGTATTTAGA AACGAAGCAA TTGATTACAA ACACTTGCCA
GAATTCTACC AGTGTGAAGG AATCGTAATG GCAGAGGATG TTAATTTTGA CAACCTCGTT
GGAATTTTAA AAGAATTTTT GAGAAAATTA GGATTTGAAA AAGTAAGAAT AAGACCTGCA
TACTTCCCAT TTACGGAACC TTCGCTTGAA GCTGAAGTTT ACATGGAAGG AAAGGGCTGG
CTTGAACTTT TAGGTGCTGG AGTATTTAGA CCTGAAGTTT TAGAACCTTT TGGAATTAAA
AAACCAGTTC TTGCATGGGG AATTGGTTTG AGCAGGCTTG CAATGTTAAG ACTTGGTCTT
ACAGATATTC GTGAACTTCA CAAAAACGAT ATGGAATGGC TTAAAAAAAC TGCGATTAGT
GAAAAATAA
|
|---|
| Protein sequence | MMELHNDEKR LLKAFQESNE KTMNLEELSK YIEKEKVMRA AFWLSGRDFL EIIENKTKMC
ELTELGKKSL DSGIPERKVA NYIKENNLES IPIKDLSKIL EKDETGAALG NLKKKDLVTI
DKGNIVFKNL DYEDIEEELL KKVLMDFNLS NYSEDEVKII ENLKKRGFLK INEVVDRSFE
LKSAGIDFIK NTIEIKEEIT QLTREMIVSG KWKDYTIRPY DAKIPTEEIY PAKAHPMSKI
IQEVNDVLIS MGFKEVKSQI VQTEFWNFDT LFEPQDHPAR DMQDTFFVKY PNTGKVPKDL
LEKVKGIHEC GTIGSEKISK GWCYKFDEKV SERTVLRTHT TVSSIKYLAS LSESERENAQ
KVFCIDRVFR NEAIDYKHLP EFYQCEGIVM AEDVNFDNLV GILKEFLRKL GFEKVRIRPA
YFPFTEPSLE AEVYMEGKGW LELLGAGVFR PEVLEPFGIK KPVLAWGIGL SRLAMLRLGL
TDIRELHKND MEWLKKTAIS EK
|
|---|
| |