Gene MmarC6_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1148 
Symbol 
ID5738208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1077222 
End bp1078244 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content34% 
IMG OID641283641 
Producthypothetical protein 
Protein accessionYP_001549193 
Protein GI159905531 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGAA AACAGCACAG GCTTTTAAGA AACATTGTTG TATATGGGCT CGGTGTCTCC 
ATAATTTCAT TTATAATTTA CAAAATAGGC ATTTTCGAAG TCTATGCAGT TTTAGCATCG
GCACATGTTG AAATCTATTT ATTGGCTGTT TTTATTTATC TGGTGACTCT TTACGTCCTT
TCAATGAGAT GGAACTATCT TTTAAAATTA AATGGATACA GTGCAGGTTC TAAAAATCTC
CTTCTTTTAA TTACAATGGG GCAATTCATA AACAACGTAA CCCCATCCAT GAAAGGTGGC
AGTGAACCAT TTAGGGCTTA CTACCTATCA AAATTAGAAA AAATACCTTA TCATGTTTCA
TTTTCAGCAG TTGTAATCGA AAGAATACTT GATAGTATTA TATTTTTGAT TTTCAGCTTT
TTTGTGATAA TATATTTCGC TTTAAGCGGG GTAGTTTACA CCCAAGCTTT TGTTTTAGCG
TGGTTTTTGG TAATGACCCT AACTGTTACT ATAATTTACC TTGCAATGCA CAAAGAATGG
GCTTTTAAAA TAACGCTCCA GATTGCAAAA ATTGTTACCA AATTTTCTTC AAAAACCTTG
AACGAGCAGA AAATAAAAGA TACAATAAAC AAATTCCAAA AAACAATGAT TTTCTTCAAG
GGAAATAGAA AAGGAATGTT AACATCCCTA ATTATTTCGT CAGTATGGTG GATATTGGAT
ATATTTAGAA TTTATGTATT GTTCATTGCA ATAAGTACGC ATGTAGCATT TATCTCGGTT
GCATCGACGT ACCTTGTAGC ATTACTTGTT GGAATTTTAC CGACTCTCCC GGGAGGCCTT
GGAACAAGTG ATACCGCAAT GATTGCAATG TATTCTTTCT TTAAAATACC GTATTCGAAC
GCGGCAGCAG GAACGCTTCT CGATAGGTCT ATATCATATA TGGGAGTTAC AATTATTGGA
TCAATAGCCT TTAAAATAAT AAAGAAAAAA GCCAAAGAAA AGGGTTATGA AGTTGAAAGT
TAG
 
Protein sequence
MDRKQHRLLR NIVVYGLGVS IISFIIYKIG IFEVYAVLAS AHVEIYLLAV FIYLVTLYVL 
SMRWNYLLKL NGYSAGSKNL LLLITMGQFI NNVTPSMKGG SEPFRAYYLS KLEKIPYHVS
FSAVVIERIL DSIIFLIFSF FVIIYFALSG VVYTQAFVLA WFLVMTLTVT IIYLAMHKEW
AFKITLQIAK IVTKFSSKTL NEQKIKDTIN KFQKTMIFFK GNRKGMLTSL IISSVWWILD
IFRIYVLFIA ISTHVAFISV ASTYLVALLV GILPTLPGGL GTSDTAMIAM YSFFKIPYSN
AAAGTLLDRS ISYMGVTIIG SIAFKIIKKK AKEKGYEVES