Gene MmarC6_1134 details

Gene Information

• Locus tag: MmarC6_1134
• ID: 5738507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 1064282
• End bp: 1064893
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 641283628
• Product: nucleic acid binding OB-fold tRNA/helicase-type
• Protein accession: YP_001549180
• Protein GI: 159905518
• COG category: [R] General function prediction only
• COG ID: [COG4085] Predicted RNA-binding protein, contains TRAM domain

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGTCTT TGGTTTTGAA CGATAAAAAA ATAGTATTTT CTTGTATTTT ATGCGTAATT 
TTTGGAATTT CTTTCTTATT TACATATAAT ATTAATCCCG AAGAAAAACA CATATCTGAT 
TTAAATGAAG GCGATTATGT AAAAATAACT GCTAAAATAC AAAAATTAGA TGTGAAAACG 
AATGAATATC TCGAAGTTAC TGGAATAAAA TCCATAAAGT TAATGGATGA AACTGCGGGA 
GATCTGTTAA TTTACGTGTC AGATGATATA TCGGATGAAT TTTTAAGATA CATACTAAAA 
ACAACTCCGC GAATAAAAGA AGGCGATATC GTTGAAGTAA CCGGAAAAAT TCAAATTTAC 
AACGGACTTT ATGAATTAGT TTTAAAGGAT CCAAATGATT TTGAATTAAT TGAAAAAGTA 
AATTTTGAAC GAGATATATT TCTTTCAAAA TCCAAAACTA ACTACTACGC ATCAAAAAAC 
AGTAAGGTGT ATCACGATAT TGAAGACTGC CCATATGGCG GAAAAATAGC CGAAAAAATC 
TATTTTAAAA GCGAAGAAGA TGCGATAGAT TTAGGATATG AAAAATGCAG TTACTGTGAA 
AAAAGGGATT AA 

 

Protein sequence

MSSLVLNDKK IVFSCILCVI FGISFLFTYN INPEEKHISD LNEGDYVKIT AKIQKLDVKT 
NEYLEVTGIK SIKLMDETAG DLLIYVSDDI SDEFLRYILK TTPRIKEGDI VEVTGKIQIY 
NGLYELVLKD PNDFELIEKV NFERDIFLSK SKTNYYASKN SKVYHDIEDC PYGGKIAEKI 
YFKSEEDAID LGYEKCSYCE KRD