Gene MmarC6_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1128 
Symbol 
ID5738736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1060458 
End bp1061048 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content27% 
IMG OID641283621 
Producthaloacid dehalogenase superfamily protein 
Protein accessionYP_001549174 
Protein GI159905512 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2178] Predicted RNA-binding protein of the translin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA GTTCTTATTT AATAGAATTC TTCGAAAAAA AGAATAATAC GCGGGAAAAA 
ATTTTGAAAA TTTCAAGGGA AATTGTAAAA GATTCCGGAC TCATTATTCG AAAAATACAG
AAAGGAGAAG AGGTAGATTT TACAGATATT GAAGAAAAAT TAAAAGAATT AAAAAAATTT
TCAGAAGATC ACTTCGAATT CCAAAAATAT AGGGGAACTC CTGAACAGGA GTATGTTGAA
GCACGAGTTT ATTATTCGAT AATCTTTGAA AATAAAATTT TGGATTTTTC TGATTTTGAT
AATATCTTGG AAGAAAGCTA TATTTTGGGT TTGTGTGACG TTATCGGCGA ACTTAGAAGA
ATAATTCTTG AATCAATTCG AAAAGACGAA AAAACAAAAG CAGAACTGTA TTTCGATTAC
ATGAATAAAA TTTACGACTT TTTAATGGAA TTTGATAATT ACCACGTAAT TGATGGACTT
AGAAGAAAAC AAGATGTTTC AAGAAGTTTA ATTGAAAAAA CTCACGGAGA TATAGTTAAC
TTCAATGAAA ATCTGAAACT TAGAATAGAA CTTTCAAAAT TTAATAAATA A
 
Protein sequence
MKNSSYLIEF FEKKNNTREK ILKISREIVK DSGLIIRKIQ KGEEVDFTDI EEKLKELKKF 
SEDHFEFQKY RGTPEQEYVE ARVYYSIIFE NKILDFSDFD NILEESYILG LCDVIGELRR
IILESIRKDE KTKAELYFDY MNKIYDFLME FDNYHVIDGL RRKQDVSRSL IEKTHGDIVN
FNENLKLRIE LSKFNK