| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0997 |
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| Symbol | |
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| ID | 5738904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 945261 |
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| End bp | 946901 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641283483 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001549044 |
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| Protein GI | 159905382 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATG ATTTCAAAAA TGCACAAATG AACAATCCCC ATTTGAGAAA TTACGTTGAA
AAATTTAAAA AAACCTACAT GAAAATTCCA GAATTTGTTC CAAGCCTTTC AAGGGATTTT
AAAGAAATAA GATATCCAAA TATAATTTAT CCGATAGGGG ACCCGATATT TATCCACCTT
TACGGAACCC CAAACTTAAA AACAAGATAT ATCGCAATAG AACCTAAATT AGGGGGTTCG
GATGAAAGAA AAAAATATTT TGAAATCCTC GATAAAATTT TAGAATACGC ACCATATAGC
GATACCCCGG AAAATGATGA AGAATTTGGA AAAATAGTCA CAAAACTATT TGACCAGGTT
ACAAAAGTAT CCACTCAAAA AAACGAAAAG AAAAAAGGAT TGTTGACAAA ATTAACAGAT
TCCGGAAAAA TAAATGTATC AAAACCTGAA AGGGAAAAAT TCCTCTATCT ATTGAAAAGA
GACCTAATTG GACTTGGAAC TCTCGAACCA ATAAAAAGAG ACCCCTACAT TGAGGATATT
CACGTAATCG GTGCTAAAAA CTGTCAGCTT GTTCACAAAA TCTACGATAT GCTTCCATCA
AATATTGAAT GGGAAGATGA AGGAGATATT TCAAATTACC TGAAAAACAT GTGTGAAAGG
ATCGGTAGAC CAGTTTCTGA TGCCACACCA ATTGTGGATG GTTCCCTGCC CGATGGATCA
AGGATAAATA TTCTTTATTC GGGAGACGTT TCATTAAAAG GCCCTTCATT TACAATTCGT
AAATTTACAG ATGTTCCGAT AAGTATTACC CAAATTATCA GCTGGGGTAC GATGTCTGCA
CAGACTGCCG CCTATTTATG GCTTTGCCTT GAATACGGGA TGAGTATATT CATCTGCGGG
GAAACTGCAT CAGGAAAAAC TACCTCTTTA AACGCAATTT TGCCTTTCAT CAAACCGAAA
TCAAAAATAT TTTCCTGTGA AGATACTTCA GAAGTAAAAC CTCCAAACCC CGTATGGCAG
CAGTTATTAA CCAGAGAAAG AGGCCCTGAA GAGAGTAGAG TTACACTATT CGATCTTTTG
AGAGCTGCTT TGAGGTCAAG GCCAAACTAT ATTATTGTAG GGGAAATCAG GTCTGTAGAA
GGGGCTGTTG CATTCCAAGC AATGCAGACA GGTCACCCAG TAATTTCAAC GTTCCACGCT
GCAAACGTTA GAAAAATGAT TCAAAGGCTT ACGGGAGACC CGATATGTAT TCCGCAAACA
TTTATGGATA ACTTAAACGT CTGCCTGTTC CAGCTTGCAG TTTACGCTAG AGGAAAATTC
TTGAGAAGGG TTGTTTCAGT TGAAGAAATT GAAGGATACT ACAAAGAAGT TGATGGGGTT
ATTACAAGAG GTGTCTTTGA ATGGGACCCT CAAAAAGACA CCCATAACTT TACCGGGCTA
AATAATAGCT ACATTCTTGA AGATAAAATT GCAACGGTTG CAGGATATGA AGATCCAAGA
GAAATCTACG ATGAACTTGA TTTAAGGGTT AGAATTCTCG AAGAAATGAT TGCAAGAGGA
ATCTTTGGAT ACTACGAGGT TTTAGATATT ATCTGGAGTT TCTATGAAAA AGGATTGGAA
GGACTGCCAT TCCAGGTTTA A
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| Protein sequence | MADDFKNAQM NNPHLRNYVE KFKKTYMKIP EFVPSLSRDF KEIRYPNIIY PIGDPIFIHL
YGTPNLKTRY IAIEPKLGGS DERKKYFEIL DKILEYAPYS DTPENDEEFG KIVTKLFDQV
TKVSTQKNEK KKGLLTKLTD SGKINVSKPE REKFLYLLKR DLIGLGTLEP IKRDPYIEDI
HVIGAKNCQL VHKIYDMLPS NIEWEDEGDI SNYLKNMCER IGRPVSDATP IVDGSLPDGS
RINILYSGDV SLKGPSFTIR KFTDVPISIT QIISWGTMSA QTAAYLWLCL EYGMSIFICG
ETASGKTTSL NAILPFIKPK SKIFSCEDTS EVKPPNPVWQ QLLTRERGPE ESRVTLFDLL
RAALRSRPNY IIVGEIRSVE GAVAFQAMQT GHPVISTFHA ANVRKMIQRL TGDPICIPQT
FMDNLNVCLF QLAVYARGKF LRRVVSVEEI EGYYKEVDGV ITRGVFEWDP QKDTHNFTGL
NNSYILEDKI ATVAGYEDPR EIYDELDLRV RILEEMIARG IFGYYEVLDI IWSFYEKGLE
GLPFQV
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