Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0908 |
Symbol | tfb |
ID | 5738226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 841578 |
End bp | 842597 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641283383 |
Product | transcription initiation factor IIB |
Protein accession | YP_001548955 |
Protein GI | 159905293 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCG AAGCTATTAC AAAAGAAGAA ACTAAAAAGC CTGAAAGAAA GATTAAACTC GCTATTGCAA AGCCTGAAGA CTATTCAAAT AAGAATGTAA TTTTGGAAAA GGAAGAAGAA TTAATCTGTC CTGTTTGCGG TAGTAAAAAT ATTATTAAAG ACTATGAAAG GGCTGAAATT GTTTGTGAAA TGTGTGGGTG TGTTTTGCAG CAGAATTTAT TTGACGTAGG TCCTGAATGG AGAGCTTTCG ACCACGAACA GCGTGTAAAA AGAAGTAGGG TAGGAGCTCC AATGACATAT ACAATCCACG ATAAAGGTTT ATCAACCGTT ATCGACTGGA GAAATAAAGA TAGCTATGGA AAAGATATTT CTGCAGATAA AAGAGCTCAA TTGTACAGGT TAAGAAAATG GCAGAGAAGA ATCAGGGTTT CTGATGCATC TGAGAGAAAT TTAGCGTTTG CTCTTTCTGA ACTTGATAGA ATCGCTTCAA AATTGGGTCT TCCAAGAAAT GTCAGAGAAA ACGCCGCAGT TCTCTACAGG GGCGCTGTAG AAAAAGGACT GATCAGGGGT AGAAGTATTG AGGGAGTTGC TGCTGCTGCA CTTTATGCTG CGTGCAGAAG ATGTAAAGTT CCAAGAACCC TAGATGAAAT TGCAGAAGTT TCGAGAGTCG ATAGAAAAGA AATCGGAAGA ACTTACAGGT TTATTTCAAG AGAATTAAAT ATCAGGCTTG CTCCAACAAA CCCTGTAGAT TACGTCCCTA GATTTGCTTC GGAATTAAAA CTTCCTGGAG AGGTAGAATC AAAAGCAATT TCAATCTTGC AAAAAGCAGG TGAAAAAGGC CTTACCAGTG GAAGGGGCCC TACAGGAGTT GCTGCTGCTG CAATATATAT TGCAAGTGTT TTACAAGGAA CTAGAAGAAC TCAGAGGGAA GTTGCAGATG TTGCAGGGGT TACTGAAGTC ACAATAAGAA ATAGATACAA AGAGTTGACA GAACATTTAG ATATCGATGT AACATTGTAA
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Protein sequence | MKVEAITKEE TKKPERKIKL AIAKPEDYSN KNVILEKEEE LICPVCGSKN IIKDYERAEI VCEMCGCVLQ QNLFDVGPEW RAFDHEQRVK RSRVGAPMTY TIHDKGLSTV IDWRNKDSYG KDISADKRAQ LYRLRKWQRR IRVSDASERN LAFALSELDR IASKLGLPRN VRENAAVLYR GAVEKGLIRG RSIEGVAAAA LYAACRRCKV PRTLDEIAEV SRVDRKEIGR TYRFISRELN IRLAPTNPVD YVPRFASELK LPGEVESKAI SILQKAGEKG LTSGRGPTGV AAAAIYIASV LQGTRRTQRE VADVAGVTEV TIRNRYKELT EHLDIDVTL
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