| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0893 |
|---|
| Symbol | |
|---|
| ID | 5738473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 830020 |
|---|
| End bp | 831099 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641283368 |
|---|
| Product | FO synthase subunit 2 |
|---|
| Protein accession | YP_001548940 |
|---|
| Protein GI | 159905278 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA TGTCCTTTAA GGAAAAAGAA ATCTCAAAAA AAGAATGCCT TGAGTTATTC
GAAGATACTG AAAACTTTTT TGATGTAATA AAACTCGCAG ATTCTCTTAG AAAGGATATT
GTCGGGGATA CGGTTACTTA CGTCGTTAAT GCAAATATCA ACTTTACAAA TATCTGTAGC
GGAACCTGCG GATTCTGTGC ATTTAAAGCA GAACCTGATG ATTCAAACGC GTTTTTTTTA
AATCCCAATG AAGTTGCTAA AAAAGCACTT GAAGCTAAAA AAACTGGTGC TACTGAAGTT
TGCATTCAGG GCGGCCTTTT AAAAGAAATA GATACCCATT TTCAGGCCGA AATCCTAAAA
AAAGTCAAAG AAATCACCGA ATCATTTGGA AAAATAGATG TGCATGCATT TTCCCCGATG
GAAGTTAAAT CTGCCGCAGA AAATGCAGGA TTAAGTGTAA AAGAAGCATT GAAAATTTTA
AAAGAGAATG GATTAAACAG CATGCCTGGA ACTGCTGCTG AGATATTAAA TGATAAAATA
AGATCTGAAA TCTGCCCTAC AAAATTAAAA ACTTCCGAAT GGATCGATGT TGTAACAAAT
GCACACAAAA CAGGTATTAA AACAACATGT ACAATGATGT ATGGGCATAT TGAAGAAAAT
AAGCATCTTG CAGAACATCT ATCAATTTTA AGAAAAATTC AAAAAGAAAC AGGCGGTTTT
ACTGAATTTG TGCCTTTAAC GTTTTTACAT GAAAATGCGC CACTTTACCA TTTAGACCGG
GTTAAAAACG GAGCTTCTGG AATGCTTGAT TTGAAAACCT ACGCAGTTTC AAGAATTTTC
TTTAAAGATT GCATTAAAAA CATACAGACT TCATGGGTAA AACTTGGAAC TAAATTGAGT
CAGGTTTCAT TGAATTGTGG TGCAAATGAT ATCGGCGGAA CTTTGATGGA AGAAAGCATT
TCAAAAGCAG CGGGCGGAAG TTACGGAACT TACATGAGCG AAGAAAAATT AAAAGACATG
ATTTTAGCAG TTGGAAGAAC TCCAAAACAG AGAAACACTG CTTACGAAAT TATAGAATAA
|
|---|
| Protein sequence | MDLMSFKEKE ISKKECLELF EDTENFFDVI KLADSLRKDI VGDTVTYVVN ANINFTNICS
GTCGFCAFKA EPDDSNAFFL NPNEVAKKAL EAKKTGATEV CIQGGLLKEI DTHFQAEILK
KVKEITESFG KIDVHAFSPM EVKSAAENAG LSVKEALKIL KENGLNSMPG TAAEILNDKI
RSEICPTKLK TSEWIDVVTN AHKTGIKTTC TMMYGHIEEN KHLAEHLSIL RKIQKETGGF
TEFVPLTFLH ENAPLYHLDR VKNGASGMLD LKTYAVSRIF FKDCIKNIQT SWVKLGTKLS
QVSLNCGAND IGGTLMEESI SKAAGGSYGT YMSEEKLKDM ILAVGRTPKQ RNTAYEIIE
|
|---|
| |