Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0851 |
Symbol | |
ID | 5738014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 792041 |
End bp | 793228 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641283326 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001548900 |
Protein GI | 159905238 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0242467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAA GCTACTCAAA ACGAATGGAA AAAATTAAAT CGTCTGAAAT AAGGGAAATA TTAAAGGTTA CCCAGAATCC CGAAATTATA TCTTTTGCAG GAGGCCTTCC TGCACCGGAA CTCTTTCCTG TAGAAGAAAT GAAAGAAATT TCGGTACTTG TTCTTGATGA AATGGGCCCA GAATCCCTCC AGTATGATGT AACGGAAGGA TATCCTCCAC TTAGACAACA AATTTCAGAA AGAATGAATA AAATATTGAA AACTGATGTT ACTAAAGATA ATATTTTAAT CGTATGTGGG TCTCAGCAAG GTTTGGACTT TTCTGGAAAA GTATTTTTGG ATGAAAATGA TGTAGTTTTA TGTGAAAGTC CAACTTACCT TGGAGCAATC AATGCATTCA AATCATACGA ACCGCAGTTT AAGGAAGTTC CAACTGATGA CTTTGGAATG ATTCCAGAAG AACTTGAAAA AATTTTAAAA ACGACCAACA ATGTAAAACT CATTTATGCA ATTCCTGATT TTCAAAATCC GACAGGAAAA ACATGGACTC TTGAAAGAAG AGAAAAATTC ATGGAAATAA TTGAAAAATA CGAAATTCCC GCAATTGAAG ATAACCCTTA TGGTGAATTG AGATTTGATG GAGAAATGTT GCCTTCATTG AAATCAATGG ATAAGAAGGA CCTTGTAATT CATTTGGGAA CGTTTTCAAA AACCTTCTGT CCGGGTTTAA GGGTAGGATG GATTGCTGCA TCGGAAAATA TCCTTGAAAA ATATATTCTT GTAAAGCAGA GCGGGGATTT GCACACATCG TCATTTTCTC AAAGAATTAT TTCAAAAATG CTTGAAAAGT ATGATTTTGA TAAACGCGTG TCCAAATTAA AAGAATTATA CAGAAATAGA AGAGATTTGA TGATTAAAAC AATTACAGAA GAATTTCCAG ACGGCCTTAA ATATACCAAT CCAGAAGGGG GGCTTTTTAC CTGGGTTGAA CTTCCAGAAG GATACAGTGC ACGTGAATTT TTAGATGAAT GTCTGAAAAA TAACGTTGCA ATCGTTCCAG GAGGATCATT CTTCCCAAAC GGAGGCCATG AAAATTCATT TAGATTGAAT TACTCGAATA TGCCTGATGA AAGAATAGTT GAAGGAATTA AAAGGCTTTC AAAAGTTTTA AAAGAATATT TAAATTAA
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Protein sequence | MALSYSKRME KIKSSEIREI LKVTQNPEII SFAGGLPAPE LFPVEEMKEI SVLVLDEMGP ESLQYDVTEG YPPLRQQISE RMNKILKTDV TKDNILIVCG SQQGLDFSGK VFLDENDVVL CESPTYLGAI NAFKSYEPQF KEVPTDDFGM IPEELEKILK TTNNVKLIYA IPDFQNPTGK TWTLERREKF MEIIEKYEIP AIEDNPYGEL RFDGEMLPSL KSMDKKDLVI HLGTFSKTFC PGLRVGWIAA SENILEKYIL VKQSGDLHTS SFSQRIISKM LEKYDFDKRV SKLKELYRNR RDLMIKTITE EFPDGLKYTN PEGGLFTWVE LPEGYSAREF LDECLKNNVA IVPGGSFFPN GGHENSFRLN YSNMPDERIV EGIKRLSKVL KEYLN
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