Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0848 |
Symbol | |
ID | 5738104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 789850 |
End bp | 791001 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641283323 |
Product | major facilitator transporter |
Protein accession | YP_001548897 |
Protein GI | 159905235 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.589458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAA AAATGAACGG TATTTACGTT CTATGGATCA CAATTTTTGT GACGATGCTC GGTATTGGTC TAATTTCGCC ACTTCTCGCG ATATTTGCAA AATCGTACGG CCTTTCAAAT TTTCAGATTG GATTGATTTT TGGTTCATTT GCACTCGTTA GAACAATCTT TCAACTTCCG GCAGGAACTT TATCTGATAC TTACGGAAAA AAAATATTTT TAGTTGCCGG AACACTTCTT TACGGGGTAA CCACCATATT TTATAGTTTT GCATCTGGAT TTGCAAGTAT ATTGATTGTT AGAACCCTTA CCGGGGTTTT TTCTGCATTC GTAAATCCTG TTGCCGGTTC ATACATCGCA CAAGTTTCCC CTAAATCAAA ACTAGGAGAA TACATGGGAG TATTTAATTC TGCTGTATCT TTAGGATTTG GTGTAGGGCC ATTACTTGGG GGATTACTTG CAGATATGTA CGGAATCATG GTTCCCTTTT ATGTATGCGG TATTTTGGGA ATTATTGCTT CAATAATCGC ATATTTTAAA CTAGAAGATA TTTCTAAATC CCAAGAAAAA CAAAAAATAT CTGGAAAAAA CTTATTTTCT CTTGAATTTT TAAAAATGAG AAATTTTAGC GCAGCATTTA TCATAAATAT CGCGATAACG ATTTCAAGGG GCGCACTTCT CGCATATCTT GCAATTTATG CATATGACTA TGGAGTTTCT GCTTTTAAAA TAGGTTTAAT GCTCGCAGCA ATGAATTTTG TGCTTGCAAT AACTCAGAAA AAATTTGGAA AAATTTTCGA CGAGAAAGGA AGTAGCATAA TTTTAAAAGG AATATTTATT GGAAATTTCG GAATGTATGT TCTTGCAATG TCCACTAACT TTATAGAAAT GTTTATTTCA TTGATTATTG CATCAATCGG GGCTTCAATG AGTACACCTG GAATAAACAC AATCGCAATT CGCGATATTC CCAATGAAAG AAAAGGCGAA GCAATGGGGC TCTATACTGC AAGTATAAAT GTAGGAATAT TCGTTGGAGC AGTATTTCTT GGGTATATCT CAGATCTCGT TGGAATTTCA AACATGTATA AAATAGGGGC AGTATTCTCA TTTTTAATAA GTTATATTGC ATATATTGCG ATAAAAAAAT AA
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Protein sequence | MQEKMNGIYV LWITIFVTML GIGLISPLLA IFAKSYGLSN FQIGLIFGSF ALVRTIFQLP AGTLSDTYGK KIFLVAGTLL YGVTTIFYSF ASGFASILIV RTLTGVFSAF VNPVAGSYIA QVSPKSKLGE YMGVFNSAVS LGFGVGPLLG GLLADMYGIM VPFYVCGILG IIASIIAYFK LEDISKSQEK QKISGKNLFS LEFLKMRNFS AAFIINIAIT ISRGALLAYL AIYAYDYGVS AFKIGLMLAA MNFVLAITQK KFGKIFDEKG SSIILKGIFI GNFGMYVLAM STNFIEMFIS LIIASIGASM STPGINTIAI RDIPNERKGE AMGLYTASIN VGIFVGAVFL GYISDLVGIS NMYKIGAVFS FLISYIAYIA IKK
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