| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0728 |
|---|
| Symbol | |
|---|
| ID | 5739118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 665623 |
|---|
| End bp | 667998 |
|---|
| Gene Length | 2376 bp |
|---|
| Protein Length | 791 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641283194 |
|---|
| Product | anaerobic ribonucleoside-triphosphate reductase |
|---|
| Protein accession | YP_001548777 |
|---|
| Protein GI | 159905115 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGTATCG CAATATTAAC CATTTTATTA ATTATTTGGC TTACTCTCTT TTTAGGTGGT
TCAATGATAG CTAATTCAAA ATATGCTGAT TTCAAAATAA ATGTTGTCAA AAGAAGTGGC
AATGAAGAAA CATTTAACGT CAACAAACTT GTAAAATCTC TTTTAAACTC TGGAGTAGAT
TATGAAAATA TAGATGCCAT ATTGTCAGAA ATCTACGGCA AAGTATACAA TGGAATGTCT
ACAGACGACT TAAAAACAAT TCTTTACAAA ACTTTGAAAG AATATGACAA AAAAACGGGC
AAAAGTTACT CCAAAAAATA TATGTCTGAA AACTGTTTAA AAATCAGAAC TTCAGAAAAA
GAATTTGAAC CATTTAATAA GGAAAAGATT GTAAAAGCGC TGATTCAGGA AGCTGGCGCT
GATTTAAAAA CTGCTGAAAG AATAGCTACA GAAGTAGAAT CAGAAGTTAA AAATTTAACT
GTAAATTACT TAACTGCTCC AATGATTAGG GAAATCGTAA ATACAAAGCT TATTGAACAT
GGACTAGAAG AATTCAGGCA CAAACACACT AGACTTGGTA TTCCAGTTTA CGATATTGTA
AAATTAATCG AAAGAGGATC TAAAGACAAC GCAAACCTCA TGCACAACCC GGAAAGTATT
CACAAATGGG TTGCTGACGA AACCATGAAA CAGTTTGCAC TCTTAAATGT ATTTCCAAAA
TATATTGCAG ATTCCCACAT GAAAGGAGAC ATTCACCTCC ACGATTTAGA ATATGCTGCA
GTTAGAACTG TCTGCTGCCA GCACGACCTT AGAAACTTCT TCAAACACGG TTTAAAAGTA
GACGGTACTG GAAGACACAC AAGCGTTTCA AAACCTGCAA AACACCCTGA TGTTGCATTA
CAGCATGCTG CAAAGGTATT GAGTGCAGCT CAGTGTGAAA TGTCTGGTGG ACAGTCAATT
GATGAATTTA ACATCTGGCT TGCACCGTAC ATGAGGGGAC TCGACTATGA GGACGTAAGG
CAGCTCATGC AGTTATTCAT CTACGAAATG AACCAGATAT ATGCTGCAAG AGGCGGTCAG
GTAGTATTCA GTTCAATCAA CCTAGAATTA GAAGTTCCAG AATTTTTAAA AGGCGAAGAT
GCAATAAAAG CAGGAGCTGT TGTTGGAGCT TACGAAGAAT ACGATTACGA AGTTAAATTG
ATCGCAGAAG CACTCGTAGA TGTTTTAATG GATGGCGATG CATACGGAAA ACCATTTTTA
TTCCCTAACG TCATTTTCAA ATTGAGAGAA AATGCATTTA AAGATGAAAA CAAAGACTTA
CTCTTAAAAA TACATGAATT AAGCGCTAAA TGGGGACTTC CATACTTCAT AAACATGCTT
GCAGACTATC AGTATGGAAA TACCAATGCA ATGGGATGCA GAACCAGATT AAGCGGTGAA
TGGGGTAATT CAATCGAAGA AAGTTCACTT AGAACTGGAA ACATGCAGTG GTATACACTG
AACCTTCCGA GAATTGCTTA CGAAGCTGAT GGTGATGACG GAAGATTATT TGAAATACTT
GACGAAAAAT TAAGTCTCGC AAAACATGCT TTAGAGATAA AACATGATAT ATCCAAAAGA
AGACTCTACC ACGACAACGT TTTACCATTC TTAACACAGG AGTTCGATGG AGAACAGTAT
TACCGATACG ATAGCACAAC GAAAACTTTT GGATTCGTTG GTTTAAACGA ACTTTTAAAG
TACCACGTTG GAAGCGAACT TCACGAGTCA CCTGAAGCAC TCGCCTTTGG TATCAAGGTA
ATTTCACACA TTAGAAAATA TGCGGATGAC TTGAAAAAAG AAACAGGACT TAGATGGACT
GTGACACAAA CTCCTGCTGA AAGTACTGCT GGAAGATTTG CAAAATTCGA CCACAGATAC
TACCCCGAAG AAACAAAATC AGTGGTAAAC GGCGATTTAA GTGATATAAA CAGCATATAT
TACACGAATT CATCACACGT TAGGGTAAAT GCGGAAGTTA CTTTGGGTGA AAAAGTAAGC
ATTGAAGAAA AATTCCACGA ACTCTGTAAT GGTGGACACA TCGGACACTT CTGGAATGCT
GAAGCTTATG CAAATCCTGA AGTTTTAATG GATATAACCA GAAAAATGAC GAAAACAGAC
ATCGGTTTCT GGACATACAC GAAAAACTTG AGTATCTGTG AAAAATGCAG TCTTGCAATG
AGCGGATTAA AAGACAGCTG TACGGGATGT GGAAGTGACA GCGTAGAGAA ATTCTCAAGG
ATTACTGGAT ACTTGCAAAA CGTTTCAAAC TGGAATAAAG CAAAACAAAG AGAATTAATT
GATAGAAAAA GCACCCTTCC TGGAAGAAGA GTTTAA
|
|---|
| Protein sequence | MGIAILTILL IIWLTLFLGG SMIANSKYAD FKINVVKRSG NEETFNVNKL VKSLLNSGVD
YENIDAILSE IYGKVYNGMS TDDLKTILYK TLKEYDKKTG KSYSKKYMSE NCLKIRTSEK
EFEPFNKEKI VKALIQEAGA DLKTAERIAT EVESEVKNLT VNYLTAPMIR EIVNTKLIEH
GLEEFRHKHT RLGIPVYDIV KLIERGSKDN ANLMHNPESI HKWVADETMK QFALLNVFPK
YIADSHMKGD IHLHDLEYAA VRTVCCQHDL RNFFKHGLKV DGTGRHTSVS KPAKHPDVAL
QHAAKVLSAA QCEMSGGQSI DEFNIWLAPY MRGLDYEDVR QLMQLFIYEM NQIYAARGGQ
VVFSSINLEL EVPEFLKGED AIKAGAVVGA YEEYDYEVKL IAEALVDVLM DGDAYGKPFL
FPNVIFKLRE NAFKDENKDL LLKIHELSAK WGLPYFINML ADYQYGNTNA MGCRTRLSGE
WGNSIEESSL RTGNMQWYTL NLPRIAYEAD GDDGRLFEIL DEKLSLAKHA LEIKHDISKR
RLYHDNVLPF LTQEFDGEQY YRYDSTTKTF GFVGLNELLK YHVGSELHES PEALAFGIKV
ISHIRKYADD LKKETGLRWT VTQTPAESTA GRFAKFDHRY YPEETKSVVN GDLSDINSIY
YTNSSHVRVN AEVTLGEKVS IEEKFHELCN GGHIGHFWNA EAYANPEVLM DITRKMTKTD
IGFWTYTKNL SICEKCSLAM SGLKDSCTGC GSDSVEKFSR ITGYLQNVSN WNKAKQRELI
DRKSTLPGRR V
|
|---|
| |