Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0369 |
Symbol | |
ID | 5737878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 329977 |
End bp | 330681 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641282833 |
Product | ABC transporter related |
Protein accession | YP_001548422 |
Protein GI | 159904760 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.548641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAAA TTATAAGTCT TGAAGATGTT TGGAAAATCT ACCAGATGGG CGAAGTTGAA GTTCAGGCCT TGAAGGGAGT TTCACTCGAT ATAAATAAAG GTGATTTTGT CGCAATTGTT GGGTCATCAG GTTCTGGAAA ATCGACCATG ATGAATATGA TAGGATGCCT TGATGTACCG ACAAAAGGTA GTGTTTACCT TAAATCAAAA AATATCTCTG ATATGACTGA ATCAGAACTA TCTGAACTTC GTGGAAAAAC AATCGGTTTT GTGTTTCAGC AATACAATTT AATTCCAAAC ATGACTGCAC TTGAAAACGT ACTTTTATCA CTGCAAATAC AGGAAGTCAA TGATTCTACT GCAGATCGAG CTGCAAAAAG AGCATTGAAA CAGGTTGGCC TAGAAGACAG GATGAACAAT AAACCGTCCC AGCTTTCTGG AGGTCAGCAA CAGCGAGTAT CAATCGCAAG AGCGTTAGCA TGTGAACCAG AAATAATTCT TGCAGACGAA CCAACAGGGG CGCTCGACAG TGCGACAGGT AAAGAAATTA TAAAATTATT TATGGCCCTC TGGGAAAGTG GGAAAACCAT TATTATGATT ACGCATGACC CGAATCTTGC AAAATATGCA AAGACCATTG TTGAATTAAA AGACGGAAAT ATCATCAGTA TATCAGATAA CAAACAAAAT ACAATTCATG AGTGA
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Protein sequence | MYKIISLEDV WKIYQMGEVE VQALKGVSLD INKGDFVAIV GSSGSGKSTM MNMIGCLDVP TKGSVYLKSK NISDMTESEL SELRGKTIGF VFQQYNLIPN MTALENVLLS LQIQEVNDST ADRAAKRALK QVGLEDRMNN KPSQLSGGQQ QRVSIARALA CEPEIILADE PTGALDSATG KEIIKLFMAL WESGKTIIMI THDPNLAKYA KTIVELKDGN IISISDNKQN TIHE
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