Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0359 |
Symbol | |
ID | 5737808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 321110 |
End bp | 322192 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641282823 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001548412 |
Protein GI | 159904750 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.821631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAG AGGCGCTTGA ATTCTTACAA AACAACTTTG TTTATGGATT ATCATATTAC TCCATACTAA AATTAATCTT AATGGTTATT ATCGGTTTAT TACTGTCATT TTTTGTTGAA AAACAGGTTA AAAAATTATC TGAAACCACA AAACAGACGT GGATAATAAA CGAAGAAACT GCAGGGCTTA TTTCAACATT TGTACTTGCA ATATTCGTAG TTCTTGCACT GAATGTCATC GAAAGTTTTG TAACATACCA AATATTTGGA TTTGACTTAA AAATTTTAAT TTACTCAATC ATTCTTATAT ATTTCACATA TCGAGTTTCT AACCGTTCTA AAAGGTATTT ATTACTAAAA GGCTCACAAG AAGGAAAATT TGCAGAATAT AGATTAAAAG CAACCCTTTT CCACTATTCT GTGATGATTA TCGCATTTGG GATCGTATTT CAGATGCTTG GCCTCACTGA CCGTTTGGGA ACTCTCCTTG TTGCAGGAGG AATTACAGGT ATAATTTTGG GTTTTGCATC CCAAACAGTC GTTGCAAATT TTATATCTGG AATCTTCCTT TATTTTGATA AACCGTTAAA AATTGGAGAT TCGGTAGAAA TTGGAACAAG TTCGGGAATT GTAAATGATA TTAAAATGAT GTCAACAAGA ATCAGAACCT GGGATGGCGT ATTAGTTAGA ATACCTAACG AAAAAGTATT CAATTCAGAG ATTATAAACA ATAAAAAATA TCCTGCAAGG CGTGTAGATA TAGAAGTTGG AATTGCGTAT AAAGAAGATG CAGATCGGGC AATTGAACTC ATATGGAACA TGCTTGAAGA TATGACCTAT GTTTTGGTTG ACCCTGAACC CCAAATATTT GTAAAAGGAC TTGGAAACAG CAGCGTTGAT ATTTCGGTAA AAGCTTGGGC TCCAAGTGAA AAATGGTACG ATGTAAAACG AGAAATCATC AAAAATATCA AAAAAGAGTT TGATCGAGAA GGTATCGAAA TTCCGTTTCC CCAGAGAACA GTATGGTTCC CGCAAGACCT TAAAATTAAA ATTGATAAAA AAAATGATGA AAAAATTGAA TAA
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Protein sequence | MILEALEFLQ NNFVYGLSYY SILKLILMVI IGLLLSFFVE KQVKKLSETT KQTWIINEET AGLISTFVLA IFVVLALNVI ESFVTYQIFG FDLKILIYSI ILIYFTYRVS NRSKRYLLLK GSQEGKFAEY RLKATLFHYS VMIIAFGIVF QMLGLTDRLG TLLVAGGITG IILGFASQTV VANFISGIFL YFDKPLKIGD SVEIGTSSGI VNDIKMMSTR IRTWDGVLVR IPNEKVFNSE IINNKKYPAR RVDIEVGIAY KEDADRAIEL IWNMLEDMTY VLVDPEPQIF VKGLGNSSVD ISVKAWAPSE KWYDVKREII KNIKKEFDRE GIEIPFPQRT VWFPQDLKIK IDKKNDEKIE
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