Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0282 |
Symbol | |
ID | 5738899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 255486 |
End bp | 257435 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641282746 |
Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
Protein accession | YP_001548335 |
Protein GI | 159904673 |
COG category | [J] Translation, ribosomal structure and biogenesis [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase [COG1370] Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit |
TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAA TAAAAGCTCG TGATGCAATG GGGAGACTTG GTGTAATCAC GATAAACGGA AAAAAAATTG AAACTCCAAC AATTATGCCT GTAATTCACC CTAATCCTAA AAAACAGACT GTTTCAATGG ATTTAATAAA CAAAATGGCA GACGTTGTAA TTACAAACTC TTACATAACA TATACAACAC CAGAACTTAG AGAAATTGCG GAAACAAAAG GAATTCACGA ATTAATCGAC TTTAAAAATG TTGTTGTAAC TGACAGTGGT TCATTTCAGT TGAGTGTTTA TGGTGATGTA AATGTCGGCC CAATGGAAAT AATCGATTTT CAGGAAAAAA TCGGTGTAGA TGTTGGAACA ATACTTGATA TCCCAACTGG CCCGGATGTT TCAAGAGAAA AAGCTGAAAG CGATTTATTA GAAACTTTTA AAAGGGCAGA AGACTCGATT AAACGAAGAA AAGAAATGGG TTACAAACTC GCACTTAATG GAACTATTCA GGGTTCAAAA TACTTGGATT TAAGGCAGAA AAGTGCTGAT GTTATGGGTA AAATGGACTT TGATATTTAT CCGATCGGTG CAGTAGTTCC TTTAATGGAA GATTATCGGT ACAGAGAAGT TGCAGAAGTT ATTTTAAATT CAAAAATGCA TCTTCCAACA AACAAGCCTG TTCACCTTTT TGGATGTGGA CACCCGATGT TGTTTGCACT TTCAGTTGCT CTTGGATGTG ATTTATTTGA TAGTGCCGCA TATGCTCTTT ACGCTAAAAA TGGAAGATAT TTAACAGCAG ATGGAACTCT CCACCTTGAA GACATGAAAG ATTTGAAAAA TTTCCCGTGC ACCTGTAAGG TATGTAGTGA ATACACCCCA AAACAACTTT TCAACTTAGA AGAAAAGGAA AAAACGAGAT TACTTGCAGA ACACAATCTT TACGTTACTT TTGAAGAAAT TGATAGAATT AAAAATGCAA TAAAAGAAGG AAACCTCTGG GAACTCGTCG AAGAAAGATG CAGGAGTCAC CCTAAACTTT TGAACGGTTT GAGGGTTATT TCAAAATATA TGGATTTCAT CGAAAAACAC GACCCGGTTT CTAAAAAATC AGGATTTTTC TACACCGGAT ATGAAAGCAT GAATAGGCCT GAAATTTACA GGCACAAACA AAGGCTTGAA AGAATTCAGT ACGATAAAAT CTATGTTACA ACAGTTTCTG AAAACACTTC AAAGCCATAC CATGAAAATT TAGACAATGT ACCTTGCGAT GTCGATGTAC TTATAAAAGA CAGCGTATTT GGGTTAGTTC CTTTAAATAT TGATACAATG TATCCATTGG CTCAAAATGA AGTACCTGAT TTGTATGATT TTGAAAAAAA ATATAACAAT GAATTTGTAA GCAACTTTAT GGAAAAAAAT TCCGAAAAAA TCCTCGATAT AAGCACATAT AACTATTACA TAAACCACTA CGGAACGAAA AAAGAATGCG ATAAAATCAA TCCTGATGTA TTCAGAGTTG GAAAAATGCT AGAATACCAG TACGGGGCAA AAATACTCGA CGATGAATTA ATGGAAAAAG TAAAGACAAG AAGAAGTAAA AATACTGGCA GAATTAGAAA TCTTTTGCTT GAAAAAGAGG TTTTGTTTAC ATTAAGGGCA AATGATAACT TCTTAATTCC TGCAAAATCC GGTGCTGAAC TCCTACATGA AAAACTCGAG TTTCCAAAGT ACAGAATTGT AATCGATAGC AGTGTTGAAG AATATGCAAG AGCTGGAAAA TCTGTTTACT CTAAATTCGT TAAAGACTGC GATCCAGAAT TAAGGCCGTT TGAAGAAGTA TTGATCGTAA ATTCTGACGA TGAATTATTG GCATACGGTA CAACAATACT TAATGGTCTA GAATTGATGG AATTTGATTA CGGTGTTGCG GCAACGCTAC GTGGTGGATT GAAAAAATAA
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Protein sequence | MFEIKARDAM GRLGVITING KKIETPTIMP VIHPNPKKQT VSMDLINKMA DVVITNSYIT YTTPELREIA ETKGIHELID FKNVVVTDSG SFQLSVYGDV NVGPMEIIDF QEKIGVDVGT ILDIPTGPDV SREKAESDLL ETFKRAEDSI KRRKEMGYKL ALNGTIQGSK YLDLRQKSAD VMGKMDFDIY PIGAVVPLME DYRYREVAEV ILNSKMHLPT NKPVHLFGCG HPMLFALSVA LGCDLFDSAA YALYAKNGRY LTADGTLHLE DMKDLKNFPC TCKVCSEYTP KQLFNLEEKE KTRLLAEHNL YVTFEEIDRI KNAIKEGNLW ELVEERCRSH PKLLNGLRVI SKYMDFIEKH DPVSKKSGFF YTGYESMNRP EIYRHKQRLE RIQYDKIYVT TVSENTSKPY HENLDNVPCD VDVLIKDSVF GLVPLNIDTM YPLAQNEVPD LYDFEKKYNN EFVSNFMEKN SEKILDISTY NYYINHYGTK KECDKINPDV FRVGKMLEYQ YGAKILDDEL MEKVKTRRSK NTGRIRNLLL EKEVLFTLRA NDNFLIPAKS GAELLHEKLE FPKYRIVIDS SVEEYARAGK SVYSKFVKDC DPELRPFEEV LIVNSDDELL AYGTTILNGL ELMEFDYGVA ATLRGGLKK
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