Gene MmarC6_0274 details

Gene Information

• Locus tag: MmarC6_0274
• Symbol: radB
• ID: 5738863
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 249074
• End bp: 249721
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 641282738
• Product: DNA repair and recombination protein RadB
• Protein accession: YP_001548327
• Protein GI: 159904665
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02237] DNA repair and recombination protein RadB

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 0.944285
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAAG AACTTTTAAA CGGAAATATC GAGAAAAAGA CGATAACTCA AATCTACGGG 
CCTCCCGGTG TCGGAAAAAC AAACATATGT ATACTTTCAA TGTTAAAAGC AATTGAAAAT 
GGTAAAAATG TTGTTTATAT TGATACAGAG GGCAGTTTAT CAATTGAAAG AATAAAACAG 
CTTTCTGGAA AAAATTGTGA CGAATTACTT AAAAATATAA TAATCTACGA GCCGTCATCA 
TTTGAAGAGC AGTCAGAAGC TTTAGAAAAG ATATTCCTTC TCGAAAATAT TGGCCTTATA 
ATTATTGATG GAATTGTTTC GCTTTACAGG CTTGAACTCT GTGACAATAT CAATGAAAAT 
ACTAAATTAA ACAGAATGCT TGGAAAACAG ATTTCTAATA TACTCAAAGT TGCTAGAATG 
AAAAATTCTG GAATTTTAAT TACCAATCAG GTAAAAGATT CGGTAAAAGG CATTGAACCT 
GCAGGGGGAA GGCTTTTAGA GTACTGGAGT AAATCAATAG TAAAAATCGA AAAAACCGAA 
TCTATTAGAA AACTCACCTT AGAAAAACAC AGGCACGCAA AAGAAGGTGA GAATTTGAAG 
TTTAGAATAC TTCAAAATGG CCTTGAAATG ATAAATAAGT CTAATTAA 

 

Protein sequence

MLEELLNGNI EKKTITQIYG PPGVGKTNIC ILSMLKAIEN GKNVVYIDTE GSLSIERIKQ 
LSGKNCDELL KNIIIYEPSS FEEQSEALEK IFLLENIGLI IIDGIVSLYR LELCDNINEN 
TKLNRMLGKQ ISNILKVARM KNSGILITNQ VKDSVKGIEP AGGRLLEYWS KSIVKIEKTE 
SIRKLTLEKH RHAKEGENLK FRILQNGLEM INKSN