Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0190 |
Symbol | |
ID | 5737802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 172134 |
End bp | 174041 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641282656 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001548245 |
Protein GI | 159904583 |
COG category | [R] General function prediction only |
COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCAGCTG AAGATATATT AAACGAGATA AAGGCGCAGG TTATAAACAA AGCACCTGGA AATGCGGTTA TTACTGACGT CGAATTTGAA GGTTCAGAAG TAGTTATCTA TGCAAAAAAC CCAGAACTTT TTTCAAACAA TCTAATCAAA GAATTTGCAA GAGATTTTAG AAAAAGACTT GCAATTCGAC CGGATCCATC TGTTTTAGTC GAACCTGATA TCGCGAAAGA TAAAATTTTA AAAATCGTTC CAGAAGATGC TGAAATTACA AACTGTATTT TTGATGCAAA CACTGGTGAA GTAATAATCG AATCTAAAAA ACCCGGACTT GTAATTGGAA AAGAAGGATC AACCCTTGAA GATATCAAAA AAGCAATTCA ATGGGCTCCA AAACCAGTTA GAACCCCGCC AATCCCATCA GATACAATCA AAGCTATTAG AGCTACAATG TATAGGGAAA GAGCAGATGT AAAAGACATT TTAAGAAGAA TTGGAAGAAG AATCCATAGG GATGTTAGAC TTAGAGATGA CTCTTGGATT AGAACCTCAT TTTTAGGTGG AAGTAGGGAA GTTGGAAGAA CATGTCTTTA CCACCAGACT CCTGAAAGCA GAATTTTGGT TGATTGTGGA ATCAACATTG CTGTTGAAGA TGAAAAAGCA TTCCCACATT TTGATGCACC TGAATTTTCA ATCGAAGAAA TAGATGCAGT AGTAGTAACC CACGCACACC TTGACCACTG TGGATTTATT CCGGGATTAT TCAGATACGG TTACGATGGA CCAGTTTACT GTACAAAACC TACAAGAGAT TTGATGACTC TTTTACAAAA AGATTACGTG GATATTACTG AAAAAGAAGG TAAAAATGTT CCATATTCAT CAAAAGATAT TAAAAACTGT ATTAAACATA CAATTCCTCT TGATTACGGA GTTACTACAG ACATTGCACC TGCAATTAAA CTGACACTCC ACAACGCTGG ACACATTTTA GGTTCAGCAA TTGCACACTG CCACGTTGGA GATGGGCTCT ATAACGTTGC ATACACAGGA GATATTAAAT TTGAAGCATC AAGATTGTTA GAACCTGCAG TATGCCAGTT CCCAAGACTT GAAACATTAA TTATCGAATC TACTTACGGA GGATACGACG ATGTACTTCC AGAAAGAGAT GAAACTGAAA AAGAATTCTT AAGAGTAATT GCTGAAACCA TCGCAAGAAA AGGAAAAGCA ATAATTCCAG TATTTGGTAT CGGAAGAGCT CAGGAATTGA TGCTAGTTTT AGAAGAAGGA TACAATCAAG GAATTTTCAA CGCTCCAGTA TATTTGGACG GTATGATCTG GGAAGCAACA GCAATACACA CGGCGTATCC AGAATACCTC TCTAAAAATA TGAGAAACAG AATTTTCCAT GAAGGAGACA ATCCATTCCT TTCAGAAGTC TTTAAAAAAG TTAAAAATAC AAATGACAGA AGAAATATTA TCGATAGCGA TGAACCAGGA ATTATTTTAA CTACATCAGG TATGCTCAGC GGTGGACCGA GTGTTGAATA TTTTAAAAAC CTCGCTGATG ATGAGAAAAA CGCAATTGTA TTTGTAGGTT ACCAATCCGA AGGAACTTTG GGTAGAAAAA TCCAAAAAGG ATTTAAAGAA ATCCCATTGA TGGGTAAAAA CGGAAGAAGT AAGGCTGTTA AAGTAAATCT TTCAGTCCAT ACCTTAGAAG GATTTTCAGG ACACAGTGAC AGAAAACAGC TCATAAAATA CCTTAGAAAA TTAAAACCAA TCCCAGACCG TATATTAACG GTTCACGGGG AAGTTTCAAA ATGTATCGAC CTTGCAAGTA CCGCATACAA GTTGTTTAAG AAAGAAACAA AAGCCCCGAT GAATCTCGAT TCAATAAGAT TGAGATAA
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Protein sequence | MSAEDILNEI KAQVINKAPG NAVITDVEFE GSEVVIYAKN PELFSNNLIK EFARDFRKRL AIRPDPSVLV EPDIAKDKIL KIVPEDAEIT NCIFDANTGE VIIESKKPGL VIGKEGSTLE DIKKAIQWAP KPVRTPPIPS DTIKAIRATM YRERADVKDI LRRIGRRIHR DVRLRDDSWI RTSFLGGSRE VGRTCLYHQT PESRILVDCG INIAVEDEKA FPHFDAPEFS IEEIDAVVVT HAHLDHCGFI PGLFRYGYDG PVYCTKPTRD LMTLLQKDYV DITEKEGKNV PYSSKDIKNC IKHTIPLDYG VTTDIAPAIK LTLHNAGHIL GSAIAHCHVG DGLYNVAYTG DIKFEASRLL EPAVCQFPRL ETLIIESTYG GYDDVLPERD ETEKEFLRVI AETIARKGKA IIPVFGIGRA QELMLVLEEG YNQGIFNAPV YLDGMIWEAT AIHTAYPEYL SKNMRNRIFH EGDNPFLSEV FKKVKNTNDR RNIIDSDEPG IILTTSGMLS GGPSVEYFKN LADDEKNAIV FVGYQSEGTL GRKIQKGFKE IPLMGKNGRS KAVKVNLSVH TLEGFSGHSD RKQLIKYLRK LKPIPDRILT VHGEVSKCID LASTAYKLFK KETKAPMNLD SIRLR
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