Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0153 |
Symbol | |
ID | 5738222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 130020 |
End bp | 131363 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641282618 |
Product | MATE efflux family protein |
Protein accession | YP_001548208 |
Protein GI | 159904546 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.226722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAGG TTCGAAAATT AAAAAGTGAA AATATTAATA AACTCCTGTT GAGGTACGTC ATCCCCTCAA TTGCCGGTAC CGTCATTATT GGAATTTACA GCATAATCGA CGGGATATTT ATTGGAAGAA CCGTTGGAAC TGGGGGGCTT GCAGGGTTAA CGCTCGCATT CCCCGTTTTA ATTGCAATTG GGGCCATCGG GATTATGATT GGAGCAGGAA CTTCTGCAAT AATTTCGATA AATCTTGGAA AAAAAGATTA TGAAATGGCT TCCCGCATTT TAAAAACTGC GTTTGCATAT ATTATTTTAA TAAGCTTCTT AATTACGTTT TTGGGATTAT TATTTATCGA ACCAGTTATT TTGAGCATGC ATCTTGCGAA AAATTTGGAA AACTACGTTT TACAGTATTC AAAAATAATA ATTATCGGGG CAATTGCACA AATTTCTGCG ATATCTCTTG ACCCGATACT TCGAAACGAC GGCTTTCCAA AAAAATCCAT GATTATATTG ACTTTAATGT CATTATTTAA CATACTACTC GATTATATCT TGATAGTGGT ATTTAATTTT GGAGTTATGG GGGCAGCTAC TGCAACTGTA CTTGCACAGG CCCTTGGATC AATTTTATAC TTAAAACATT TCTTAACTGG CAAGTCAAAT GTAAAAATTG GAAAAAACAA TCCATTTTCT GAATTTTCAA TTATAAAACG AATTACAAAA ACAGGATTTT CACCATTTAT TATGGAACTT GCATTTGGAT TGCTGATGAT AGTGCATAAT ATCCAGTTTA TACGATACGG AAGTTCTTTG GACGTTTCTG CATACGGTAT TGTAATATAT ATCACATCAT TTCTATACAT GGTCTATTTA GGGATTTCAG AAGGCGTTCA ACCACTAATT AGCTATAATT ACGGGGCTAA AAAATTTAAC AGGGTTTTTG AAATATTAAA AAAAGCAGTA TTTGTTAATG CGATACTTGG TATTTGTTCA TTTTTAACGA TTTTAAAGTT CCCAAACCTT TTAATAAAAA TTTTTAATCC GAATGATACG AATTTAATAG CAACAACCAC AGTAGGCCTT GAGATACATA ATTTCGCAAT TTTAATTCTT GGAATATCAA TGGTTTTAAC GATGTATTTT TTAGCTACAG AACAGCCAAA AATTGCGGGT TTTTTGTCTC TTGGAAGAAC CATAATATTT ATTCTTCCTG CAATCATTAT ATTCCCAATA TATTTTGGAA TTAAAGGAAT ATGGTGGGCC ACCGTATTTT CAGAGTACAT GAGTCTTATA TTTACCATTT ACTTCATATC TAAAGAGCTT AAAAAGATAA AGAAAATAAG TTAG
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Protein sequence | MEQVRKLKSE NINKLLLRYV IPSIAGTVII GIYSIIDGIF IGRTVGTGGL AGLTLAFPVL IAIGAIGIMI GAGTSAIISI NLGKKDYEMA SRILKTAFAY IILISFLITF LGLLFIEPVI LSMHLAKNLE NYVLQYSKII IIGAIAQISA ISLDPILRND GFPKKSMIIL TLMSLFNILL DYILIVVFNF GVMGAATATV LAQALGSILY LKHFLTGKSN VKIGKNNPFS EFSIIKRITK TGFSPFIMEL AFGLLMIVHN IQFIRYGSSL DVSAYGIVIY ITSFLYMVYL GISEGVQPLI SYNYGAKKFN RVFEILKKAV FVNAILGICS FLTILKFPNL LIKIFNPNDT NLIATTTVGL EIHNFAILIL GISMVLTMYF LATEQPKIAG FLSLGRTIIF ILPAIIIFPI YFGIKGIWWA TVFSEYMSLI FTIYFISKEL KKIKKIS
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