Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0110 |
Symbol | |
ID | 5738772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 87450 |
End bp | 88424 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641282576 |
Product | integrase family protein |
Protein accession | YP_001548166 |
Protein GI | 159904504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.126491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAA TGGAAAGAAG ACTTTTGTAT GCTGACAAGC CCGAACCTGT TAAAAAAACA GAAGAACAGA ACAAGTACGT TAAAAAATTT AGGGAAGAGC GAGAATTTGA CAATATCAAA AAAACCACAA TTTTAAACGA TATCGTTCGA TTGAGGGTTT TTCTGGCATT TTGTGAAGAA CTGGAAATGG AACCGTTTGA ACTTTCAACT CACGACTTTG TAAAATTCTT TAACTACCTA ACCAATCGAA GAAACTGTAG TATAACAACT CAGAACAAAT ATTTTAATCT TTTAAAGGTA TTTTACAGGC TTTTGAGATA CGAAAACTTC AGGGAATTTG AAATCGAAAG TAACAACAGG AAGCGATTTA CAAAGTACGA GAAGAAACAC TACGATACAA TCGATTTTGA GACCTACACG AAGATTTTAA AGGAAGTTGT TTTGAGTAAC TCCAGGACAA AAGTTAGAGA TGCACTTCTC ATCAGGGTAC TTTGGGAGAC TGGTTGCAGG AGATCCGAAG CACTGAACAT CAGGTACAAA GATTGTGATC TTGAAAAAGG CAGGTTCAGA ATCAGAGATA CGAAAACTTA CGAAGAACGA ACTGTCGTGG TTTCGGAAGA TACCTTGAAA ATTGTCATCG ATTACATTAA ACAGAACTTA AGAAGAGATG CTGATGACTT CATCTTCCAG AATGAAGTTA CATTTAACGG AAAACGTGTA AAACCCGACT GGGTAACTGC AGTATTTAAA AAAGCAGTTA ACAAATTAAA AGAAGATGGT GCTATTCCAA AAGGCCGGAG AGTTGTAGTA CACAGTTTAA GACACGGAAG AGCAACAGAT CTTTTGGATA AGGGTGTTCC AATCGATATT GTAAAAGAGA TCCTTGGCCA CAAGTCTTTA GAAACTACCC TTTACTATTC GCACTCAAAA GAGAGAAAAG AGAAACTTCT CGATGAAATT CAGAAATTAC TTTAA
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Protein sequence | MNEMERRLLY ADKPEPVKKT EEQNKYVKKF REEREFDNIK KTTILNDIVR LRVFLAFCEE LEMEPFELST HDFVKFFNYL TNRRNCSITT QNKYFNLLKV FYRLLRYENF REFEIESNNR KRFTKYEKKH YDTIDFETYT KILKEVVLSN SRTKVRDALL IRVLWETGCR RSEALNIRYK DCDLEKGRFR IRDTKTYEER TVVVSEDTLK IVIDYIKQNL RRDADDFIFQ NEVTFNGKRV KPDWVTAVFK KAVNKLKEDG AIPKGRRVVV HSLRHGRATD LLDKGVPIDI VKEILGHKSL ETTLYYSHSK ERKEKLLDEI QKLL
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