| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0096 |
|---|
| Symbol | |
|---|
| ID | 5737792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 75485 |
|---|
| End bp | 77002 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641282562 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548152 |
|---|
| Protein GI | 159904490 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATT TTGCAGTCAG TCAACCAAAC TATGCCCCCC AAGCCCCTTA TGGACTGGGT
TATCTAAACA CCAACCCCTC GATAATACAT AATCCGGAAA TTAAGGATCA TCTTACCTAT
AATTTTAACC ATTCTCTCGA AAAGACTGCC TGTTTTGTGG AATTTTTCAT GGACCGTAAA
TTGCATCAGG CCCAGGAGGA AATTGCTGAA GCTATTGACT CTGAGATGTA CGATGTAATC
ACCATAAATA TAGGAAGGCG GGGTGGAAAG ACTGAGGTGA TGGGCGGAGT TGGTCCTAAA
TTCTGTTCAA AATACAGGGG TTTTTCTGTT CTCGTTGTAG CTCCGGTGTA CAACCAAGCG
AAGACGATGT ATAAAAAAAT TAAACGGGGC CTTGAAAGTA ACAAGGAATC CAGACAGCTT
GTAAAACCTA AAAAAGAAGG TTTTAAAGAA AGTCCTTTCC CATTAATTAC GTTTTACAAC
GGGTCCACAA TTGAGTTCAA ATCTGCAGAA ACTCCTGACA ACTTGCGATC TGAAGGATAT
GACTTAATTA TTGTAGATGA AGCTGCGTTT GTAGATGATG AAATTATTTC CGCTGTTTTA
GAACCAATGC TTATGGATTC TGGTGGAATT CTAGTAAAAA TCAGCACTCC TTGGGGAACT
GGGAACCACT TTTATGATTC TTACATCAAA GGTGAGCTCC AGGCGAAAAT GCTCGAAGAG
GGCGAAGGAA TTCCTGAAGA TGAGCTCAGG TACAAATCTT TTAAATTCCC CTCCTGGGTA
AATCCGTATC TCTCGAAAAG ATTTCTTATG GGTAAAAAGA AGGATCTCGG TGAAGATAAT
CCTGTGTGGC TTCAGGAGTA CTGTGCTGAA TTTATCGAAG ATGATACAAC TGTGTTTTCA
ACAGCTCATG TGCAGGCATG TCTCTCAGAT GCGTTTGAAA CCCATTATAA AACTGAAAAT
TTAATTTATT TGATTGACGA AGGGGAAAGA AATAAAGAAT ATGTAATCGG GCTTGACTTG
GCAAAGCATA ACGATTACAC GGTATTTATT GTACTGGATA TCACAACAGG GCCCCCATAT
ACTCTAGTTT ATTTCGAAAG ATTTAACGGG ATCGATTACA CTGATATCGC TGAAAAACAT
CTCGCTTTAT CCGAGGCGTT TAACGATGCT CCTGCCTGTG TAGACCAGAC CGGAATTGGT
GAAGCCTATA TGGACATTGC AAAGAAAGTG GGCCTTGATA ATTTAACAGG ATTTAAATTT
ACAAATGAGT CTAAAACCGA AATTATAACG AAACTATCGA CTTCTTTTAG AAATAAAGAA
GTTGTAATGC CTAAAATTAG AGTTTTATTA ACAGAATTAA AAGCATTTAT GAGATTTAGA
ACTAAAACGA CGTTTAAACT GGAAGCACGG TCTGGATTCC ATGACGATAC TGTTTGTGCA
TTTGCTCTTG CGATGCATGG AGTTGAAAAT TGTACTTCAG GAGTAGGATC GATTGCATTT
ATCGGAGCTT ACAGTTAA
|
|---|
| Protein sequence | MSDFAVSQPN YAPQAPYGLG YLNTNPSIIH NPEIKDHLTY NFNHSLEKTA CFVEFFMDRK
LHQAQEEIAE AIDSEMYDVI TINIGRRGGK TEVMGGVGPK FCSKYRGFSV LVVAPVYNQA
KTMYKKIKRG LESNKESRQL VKPKKEGFKE SPFPLITFYN GSTIEFKSAE TPDNLRSEGY
DLIIVDEAAF VDDEIISAVL EPMLMDSGGI LVKISTPWGT GNHFYDSYIK GELQAKMLEE
GEGIPEDELR YKSFKFPSWV NPYLSKRFLM GKKKDLGEDN PVWLQEYCAE FIEDDTTVFS
TAHVQACLSD AFETHYKTEN LIYLIDEGER NKEYVIGLDL AKHNDYTVFI VLDITTGPPY
TLVYFERFNG IDYTDIAEKH LALSEAFNDA PACVDQTGIG EAYMDIAKKV GLDNLTGFKF
TNESKTEIIT KLSTSFRNKE VVMPKIRVLL TELKAFMRFR TKTTFKLEAR SGFHDDTVCA
FALAMHGVEN CTSGVGSIAF IGAYS
|
|---|
| |